Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_54091 |
Symbol | CK2_1 |
ID | 7197441 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 453709 |
End bp | 455370 |
Gene Length | 1662 bp |
Protein Length | 341 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177936 |
Protein GI | 219112369 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCCACTCACA GTCAACTCGA GCGCCTTCCT TCCAACACAC GAGTCGGGTA TTCTTTTGTG TTGTGTGAGC AGTGCACGGG TTTCTGTCTC GTTGGCTCCA GACGTACACG TCTCTTCGCC AAGTACGACG ACGTTTCACA ATCAGTCGCC GACGAGTCAT CCAAGTCTTG TTGCGTCCGC AACCTGCACG CCGCATCAAA TCCGCTGTTG CTGCCAATAC TAACTTAGCC CGTGTCGATA CTTGCGTCAT GAGTCGTGCC CGGTAGGTAA CAAACAAACC TGTGTTGACA TTATGTGTGG ATAGCGCTCG GGATACAGAC TGACGGAGTC TCCAATCACA CGCCTTCCAC CTTTTCGTAC CTCCCCTATA CGTGTCGCTC ACCTTTCCGG AACTGTGCTA TTGTCCTTTC TACCTCGCTT CCATTTGTTG CATTGTAGAG TTTACGCCGA TGTGAACGTT CACCGGCCCC GGGATTATTG GGATTACGAA GCACTCACGG TAAATTGGGG CGATCAGGAG GAATACGAAG TCATTCGCAA AATTGGCCGC GGCAAGTACT CGGAAGTCTT CGAGGGCATG AACGTCGTCA ACAACACTAA ATGCGTCGTC AAGATACTCA AGCCCGTCAA GAAAAAGAAG ATCAAGCGGG AGATCAAGAT CCTCCAGAAC ATGTGCGGAG GCACCAACAT CATTCAGCTC CTCGATGTTG TGCGGGATCC GCAATCCAAG ACACCGTCGC TCATTTTCGA ACACGTCAAC AATACCGATT TTAAAATATT GTACCCCACC CTCTCGGACT ACGATATTCG CTTTTATATC TACGAACTCT TGAAAGCGCT GGACTACTGT CATTCCAACG GCGTTATGCA TCGGGATGTG AAACCGCACA ACGTCATGAT TGACCACGAG CGTCGGCAGT TGCGGCTGAT TGATTGGGGA TTGGCTGAGT TCTACCATCC CGGACGCGAG TACAACGTCC GGGTAGCCTC CCGGTATTTC AAAGGGCCGG AACTTCTCGT CGACTTGCAA GAATACGATT ATTCTCTCGA TATGTGGAGC TTGGGATGCA TGTTTGCTGG AATGATCTTT CGCAAGGAAC CCTTCTTTCA CGGACACGAC AATTACGATC AGTTAGTCAA AATTGGCAAG GTTCTTGGTA CAGAAGAACT CTTTCATTAC CTTGATACTT ACGATCTCGA GTTAGATCCC CATTTTGACG GAATTCTCGG ACGTCATTCC AAAAAACCTT GGCAGAAGTT TGTCACACCA GAAAACCAAC ACTTGGTCAG CGACGAAGCC ATTGATTTTG TCTCGAAATT GCTGCGGTAC GATCATCAGG AACGGTTGTC GGCCCAAGAA GCTATGACGC ACGCTTACTT TGCGCCCGTT CGTGAAGCTG CTGTACGTGA AAACGCACGG GGAGCGGGTA CCGCGGGATT TCAAGTCTAG GGGTATCCCA CGACGATGAG AAACAAAGTA ACAGACACAC ACACATCTCC CTCTTTTGAT CCAACAATGT CTAATCGAAT TGACATTCCT ATATCCCGAG TACGTAGCTT TTTGCTAGAT TATTGTATGT GCCCGTAGAT GGTTTTGGAT GGGTACGTGC GCATTGTTCT CATTGCGAGC ATTGTAATTA ATTTAATGGA ACTGCATTTC AG
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Protein sequence | MSRARVYADV NVHRPRDYWD YEALTVNWGD QEEYEVIRKI GRGKYSEVFE GMNVVNNTKC VVKILKPVKK KKIKREIKIL QNMCGGTNII QLLDVVRDPQ SKTPSLIFEH VNNTDFKILY PTLSDYDIRF YIYELLKALD YCHSNGVMHR DVKPHNVMID HERRQLRLID WGLAEFYHPG REYNVRVASR YFKGPELLVD LQEYDYSLDM WSLGCMFAGM IFRKEPFFHG HDNYDQLVKI GKVLGTEELF HYLDTYDLEL DPHFDGILGR HSKKPWQKFV TPENQHLVSD EAIDFVSKLL RYDHQERLSA QEAMTHAYFA PVREAAVREN ARGAGTAGFQ V
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