| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_51970 |
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| Symbol | |
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| ID | 7201046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | - |
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| Start bp | 842786 |
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| End bp | 844453 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180331 |
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| Protein GI | 219119129 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0997978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTCAC GACTTCCCGT TACGGGCGTC GAAGTCGTTC GCGATACTAT TCGATATTCT
GGGGTATCCA CTCCGATTTC CGAACGGGAA GGCTTGGGGA TTCGAGGCTT GGTACCCGCT
GCCTTTCTCC CACTCGAACT CGACGTCGAA CGATGCATGT TGCAAATGCG GTCCAAAGAA
TCGCCACTGG AAAAGTACAT TTATCTGCAC AACATTCAGG ATGTCTCGGA ACGTCTCTTT
TATGCTATTC TTTGCAAGTA CACGTCCGAA GTCATGCCGT TGGTCTACAC ACCCACCGTC
GGTGAAGCAT GTCAGAACTT TTCGGCCATT TATCGGGGTA CGCTTCGCGG CATGTACTTT
TCGCTAGAAG ATTCGGGCAA GATTCGTACA CTCCTCGACA ATTGGTTTAC CTCCAAGATT
ACTACAATTG TTGTCACGGA TGGTGAACGG ATTCTAGGAT TGGGTGATCT CGGTGTCAAC
GGTATGGGTA TTCCCATTGG GAAATTGGCC CTGTACACGG CCTGCGGTGG CATCGATCCG
GCCAAGGTCT TGCCGGTACA CATTGACGTG GGCACCAACA ACGAGGAAAA TCTGAACGAT
CCGTACTACC TCGGTCTTCG ACGGCCTCGG GAGCGAGGGC AAGCCTACGA TGATTTGATT
GCCGAGTTCT TTGAAGCTGC TCAGAACAAA TTCGGAGCCA ATGTGATGAT TCAATTCGAG
GACTTTGGTA ACTTGAACGC CTTCCGGCTA CTAAGTGCGT GGCAAGACAA GGCCTGCACT
TTCAATGACG ATATTCAAGG AACGGCAGCC GTGGCTCTGG CCGGTTTGCT TGCTTCCAAC
CGACTCACTG GCAAAGACTT GATTGATCAC ATTTTTTTGT TTGCCGGCGC GGGGGAAGCC
GGGACCGGTA TTGCTGAACT ATTGGCGCTC GCCATTGCCG AGAAGGGCCA CTTACCAATT
GAACAAGCTC GGAAGAAGAT CTTTCTCGTC GATTCGAAGG GTTTGGTGAC CAAATCGCGT
TTGGATAGCC TACAGCACCA CAAGGTCGAT TTTGCGCACG ATGTGGACGA CTGCCCAAAC
TTGTTAGCAG CAATCGACAT GCTCAAGCCT ACCGGATTGA TCGGTGTATC CGCCATTCCG
AATTCGTTTA CGAAAGAAAT TTGCGAAAAC ATGGCTGCCC ACAACAAAAT TCCGGTCATT
TTTGCGTTGA GCAATCCTAC GTCCAAGGCG GAATGCACGG CGCAAGAAGC CTATGAATGG
ACCGATGGGC GTGCAATTTT TTGCAGCGGC AGTCCATTTG ATCCGGTGAC GTTGCAGGAT
GGGCGCCAAC GTGTCCCGGG GCAGGGCAAC AACGCATACA TTTTCCCGGG CATTGGGCTT
GGCGTATTGG CGGCCGGATC TACTCGCATT ACAAATTACG ATATGCTGTT GGCAGCGGAA
ACGTTGGCGG CGGAAGTAGG TCCCGAAGAG TTGGACGTCG GTTGCATGTA TCCTCCACTG
TCTCGGATCA GACAGGTTTC GAAAAACATT GCAATCGCCG TTGCCAATCA GGCGCACGAA
ACGGGAGTAG CAACCGAGCA GAGACCGGTG GATATGGGAA AGTACGTGGA ATCACTCATG
TACGATCCAT TTGAGGAGGT TGACGTTCAC TTGGGATCCA AGAAGTAG
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| Protein sequence | MVSRLPVTGV EVVRDTIRYS GVSTPISERE GLGIRGLVPA AFLPLELDVE RCMLQMRSKE
SPLEKYIYLH NIQDVSERLF YAILCKYTSE VMPLVYTPTV GEACQNFSAI YRGTLRGMYF
SLEDSGKIRT LLDNWFTSKI TTIVVTDGER ILGLGDLGVN GMGIPIGKLA LYTACGGIDP
AKVLPVHIDV GTNNEENLND PYYLGLRRPR ERGQAYDDLI AEFFEAAQNK FGANVMIQFE
DFGNLNAFRL LSAWQDKACT FNDDIQGTAA VALAGLLASN RLTGKDLIDH IFLFAGAGEA
GTGIAELLAL AIAEKGHLPI EQARKKIFLV DSKGLVTKSR LDSLQHHKVD FAHDVDDCPN
LLAAIDMLKP TGLIGVSAIP NSFTKEICEN MAAHNKIPVI FALSNPTSKA ECTAQEAYEW
TDGRAIFCSG SPFDPVTLQD GRQRVPGQGN NAYIFPGIGL GVLAAGSTRI TNYDMLLAAE
TLAAEVGPEE LDVGCMYPPL SRIRQVSKNI AIAVANQAHE TGVATEQRPV DMGKYVESLM
YDPFEEVDVH LGSKK
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