Gene PHATRDRAFT_5128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5128 
Symbol 
ID7194770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand- 
Start bp93914 
End bp94504 
Gene Length591 bp 
Protein Length197 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183153 
Protein GI219125785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.199024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGAATTTG CACACGGCAC GACGACATTG TCTTTTGTGT TTCAGGGAGG GATTGTCGCA 
GCCGTCGATT CTCGCGCAAG TCTGGGGAGT TTTGTAGGGT CGAAAACCAC TCAAAAGGTC 
TTGCCCATTA ATTCGCATAT GTTGGGCACT ATGGCTGGTG GTGCTGCCGA TTGCTCCTTC 
TGGATTCGGA AGTTGCAGGG TGAGGCCGCC ATGCACGTAC TGACGCTGGA CGGACGCCGA 
ATGTCGGTGG CTCGGGCATC ACGGCTTTTG TCCAATGCCT TGTATGACAA TCGAAAATTG 
GGCCTCTCTG TCGGGACTAT GGTTATGGGC TTTGACGACA CAGAAACAAA ATCTAGTCGA 
GCACGAATAT TTTACGTTGA CAACTCCGGC ACACGCATTG AAGGAGACGT CTTTGCAGTA 
GGTTCTGGAA GTACTTTTGC CCTGGGTATT TTGGATACAG AGAAGCGTCA TGATCTAACG 
GTGGACGAGG CCGTGGCGTT GGGTCTGAAG GCGATTCGAC ACGCAACATT TCGGGATGCC 
TATTCGGGAG GATTCATTAA CGTATATTTG ATAACTCACG AGCATGGTTG G
 
Protein sequence
LEFAHGTTTL SFVFQGGIVA AVDSRASLGS FVGSKTTQKV LPINSHMLGT MAGGAADCSF 
WIRKLQGEAA MHVLTLDGRR MSVARASRLL SNALYDNRKL GLSVGTMVMG FDDTETKSSR 
ARIFYVDNSG TRIEGDVFAV GSGSTFALGI LDTEKRHDLT VDEAVALGLK AIRHATFRDA 
YSGGFINVYL ITHEHGW