Gene PHATRDRAFT_50885 details

Gene Information

• Locus tag: PHATRDRAFT_50885
• ID: 7200500
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 70759
• End bp: 72923
• Gene Length: 2165 bp
• Protein Length: 602 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179573
• Protein GI: 219117560

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGATGCGATG AGTATTGTGG AACGACACAT CCATCACTCC TCGTGGCGTG ATGACAACAG 
TGAACGAACA AGAAGCCGCG GACCTTCCGC TGTAAATAAA GCAGCACAAG CCGGACTTTC 
CTTCGAGTCG TTGATTCTGG TTGTCAACCA AAAGTCTGCG GAAAACTAGA CTAGCTTGTT 
CTTCACATTC CGCTGGTAGC ATGCCACTCT TTCGTTCATC GTCTCTTATC ATGGCTGCCA 
TTCTGAGTAG TTGCTGTTGG ATGCGGTCCT GTCGTGCGTT TGTTGGTCCT GCTTCTAGCA 
TTAGTACCAG TGCGGCGATC CAAAGACTGA CTACGCCTTT GTCTCGTCAC GGCCCGCTCT 
TTTCGACGGC GTCCAAGAAG GAGGCCGAGG CTCCCAGCGA TGTAGTCGTT GCCGAAGCCT 
TGACGTATTC CATGGAAGAC GTCGTCGGCT TGTGCAAACG GCGGGGAATC ATTTTCCCAT 
CGTCCGAAAT ATATAACGGT TACGCCGGAT TCTATGATTA CGGCCCGCTC GGCAGCGAAC 
TCAAAAAGAA CGTCAAGGAT GCCTGGTGGA AGAATTTCGT CATGATGCGC GAGGACGTCG 
TTGGTGTCGA CTCCTCCATT ATTCACAATC CGGAGACCTG GAAATCGAGT GGTACGAGAA 
CACTACAGAA AACGGAAAGG AATGTCTGCC TATTGTTGCG CGCCACTCAT GAATTTGTCT 
TGTCATGTTT CACGACTCGC GGTAGGCCAC GTCGACGGCT TTTCCGACCC CATGGTGGAT 
TGTAAGGAAA CCAAACTCCG GTACCGGGCC GACCAGCTAT TCTACGCCCC CGTCATGGTG 
AGTGGCGAAG CAGAAGTTCT CGGATACTTG TGTGTCCAGG AAGCTAATGA AGCGGACATG 
GCCAAGGAGG CGAAAAAACA AGCCAAGGCG CTGCTCAAAT CGTTGGACCG CAAAGGCGAA 
ACCGTCCAAG AGCCGTTCGA CTTTCGTGAA GTAGTGGAAG CGACCGAAGC CGAAATGGCC 
CAAATACCGT CTCCTGGCTC CGGTAAACCA ACACTCACCA TGCCACGAGC CTTCAACCTC 
ATGTTCCAAA CGCAAGTGGG GGCCTTGTCC GACGCGGCAT CCGTGGCTTA CTTGCGACCG 
GAAACGGCTC AAGGCATCTT TCTGAATTTC AAAAACGTAC TGACCACCTC GCGACAGAAA 
ATACCTTTTG GAATTGCCCA GATTGGTAAG GCCTTTCGCA ACGAAATCAC CCCCCGAAAT 
TTCATTTTTC GGTCACGCGA ATTTGAACAA ATGGAAGTCG AATACTTTAT CCCACCCGGC 
GATGAAGTTT GGCCGGCGTT TCATCAGCAA TGGATAGATG ATTCAAGGGC GTTCCTGCTT 
TCCATTGGAT TGCAGGAAGA ATTGCTCGGA TGGGATGTGC ACGAGGGGGA CAAGTTAGCG 
CATTATGCAC AAGCCTGTAC CGATATCACT TTTAGATTTC CGTTCGGTGA ACAAGAACTT 
ATGGGAATTG CCGCGCGTGG CAATTACGAT TTATCGCAAC ACTCGGAGGG ATCCGGCAAG 
AGTAAGTTAC AAAGCGTGGT CGTATTTATT GGCAGCCTGC TCCGGCGTAG GAACGCTCGA 
GGCGTTTCGG GCTTTCTTAA ACTCATATGC CATTTGCTTC AATTCTGTAG GTCTGGAATA 
CTACGACGAA CAGACCAAAG AAAAATATAT TCCGCATTGC ATTGAACCGT CGCTCGGTGT 
CGATCGTCTA ATGCTGGCCT TGATTTGCTC GGCGTACGCA GAAGACGAAG TAGGCGGAGA 
GAAACGTAGT TTGCTCAAGT TTGACCCAAA GATTGCACCC ATCAAGGTTG CCGTCTTGCC 
TTTGTTGAAA AACAAGGAAG AGCTAGTGTC GGTTGCCCGG GACTTATTCG ATAAACTTCG 
TCGTAGGTGG AACTGTCAAT ATGATGCTGC GGGTGCTATT GGACGGCGGT ACCGGCGAGC 
GGATGAAGTC GGTACACCTT ACTGCGTTAC GATTGACTTT GATACAATTG AAACGGATAA 
CGCCGTCACA ATTCGCGATA GGGATACGAC GGATCAAGTC CGAATTCCGC TTAAAGATGT 
GATTTCGTAC TTGAGCGAAC GTATCGACGG ATACTAAAGA TAAAAAACGC TTGTCTTATT 
GCTTC 

 

Protein sequence

MPLFRSSSLI MAAILSSCCW MRSCRAFVGP ASSISTSAAI QRLTTPLSRH GPLFSTASKK 
EAEAPSDVVV AEALTYSMED VVGLCKRRGI IFPSSEIYNG YAGFYDYGPL GSELKKNVKD 
AWWKNFVMMR EDVVGVDSSI IHNPETWKSS GHVDGFSDPM VDCKETKLRY RADQLFYAPV 
MVSGEAEVLG YLCVQEANEA DMAKEAKKQA KALLKSLDRK GETVQEPFDF REVVEATEAE 
MAQIPSPGSG KPTLTMPRAF NLMFQTQVGA LSDAASVAYL RPETAQGIFL NFKNVLTTSR 
QKIPFGIAQI GKAFRNEITP RNFIFRSREF EQMEVEYFIP PGDEVWPAFH QQWIDDSRAF 
LLSIGLQEEL LGWDVHEGDK LAHYAQACTD ITFRFPFGEQ ELMGIAARGN YDLSQHSEGS 
GKTCSGVGTL EAFRAFLNSY AICFNSVGLE YYDEQTKEKY IPHCIEPSLG VDRLMLALIC 
SAYAEDEVGG EKRSLLKFDP KIAPIKVAVL PLLKNKEELV SVARDLFDKL RRRWNCQYDA 
AGAIGRRYRR ADEVGTPYCV TIDFDTIETD NAVTIRDRDT TDQVRIPLKD VISYLSERID 
GY