Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50725 |
Symbol | Lhcr3 |
ID | 7197307 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 847714 |
End bp | 848728 |
Gene Length | 1015 bp |
Protein Length | 199 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | protein fucoxanthin chlorophyll a/c protein |
Protein accession | XP_002178019 |
Protein GI | 219112535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.958322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGCAATCTT CACCATGATG CGATCTACCA TTCTTGCTGC CTTGTTGGCC AGTGCCGCGG CCTTCGCCCC TGCTTCCATG GTATGTTTGT GTGAGAATGT CGGAGACGGA TAGGAGCCAA TTTTTTGGAT TGGAAAGGTA GCCGGGCAAC AAATTTGTAG TTTTGGAAAG CGAGTGAGCA ACGTTCGGAA TATTGCTTAG CTCAACCGGG GTATCTTTGG ATCGTGACCC GTGTATGTCT GTAGTAGAAG CCTCTGATGT GTGCGATCTT TCTTATTTAT GATATAGCAG TCCCAGCGGG CTGGATCTGT TTCCTTGAAC GCCGAGGAAA TGTCCAAGTC CATTCCTTTT TTGGTCAAGC CCGACAAGCT GGATGGATCG ATGGCTGGCG ACATGGGATT CGACCCCATG CGACTGTAAG TGCCCTCTAC CACGACAAGA AAACGAAGGC CAATCCTACC GACAGTGTCA CTTACCCTTT CTCTTACGCA TCGTCTCTCG CAGCTCGGAC ATCCAGACCG ACTTGAAATA CGCTCGCTGG AGCGAAATCA AGCACGGCCG CATCTGCATG CTCGCCATTG TCGGAATTTT GGTCCAACAA GCTGGCATCC ATTTGCCGGG TGAACAGTTC ACCAATACGG ATATTTTCGG TGCCGTCGAC TCGGTCGGAT TCGGCGCCAA CATGCAGATC TTTGCCGGAA TCGGTGCCGT GGAAATCGCC ACCTTCAATA AGCACTACGG AGAGGGAGAG CCGGGTGATC TTGGCTTTGA CGGTGGTCAG TTGAAAGGAG CGAGTGCCGA CAAGATTGCT CTTCGTAAGG AACAAGAAAT TGTCCACTGC CGTCTTGCTA TGATTGCCTT CCTGGGTGCC ATGGGTCAGA CTCTTTTGTT CGGACAGGCT CTTCCCTAGA TTGGGACTTG CTTGGCAGTC TTGGAAGATC GCTAGGAGCG AAGTCTATCT CTTTAAGGGA AGTAATTACT TTGCCTACAT AACTATTCTT GCTTCAGCGG ATTCT
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Protein sequence | MMRSTILAAL LASAAAFAPA SMQSQRAGSV SLNAEEMSKS IPFLVKPDKL DGSMAGDMGF DPMRLSDIQT DLKYARWSEI KHGRICMLAI VGILVQQAGI HLPGEQFTNT DIFGAVDSVG FGANMQIFAG IGAVEIATFN KHYGEGEPGD LGFDGGQLKG ASADKIALRK EQEIVHCRLA MIAFLGAMGQ TLLFGQALP
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