| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50630 |
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| Symbol | |
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| ID | 7199474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011701 |
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| Strand | - |
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| Start bp | 18925 |
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| End bp | 21887 |
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| Gene Length | 2963 bp |
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| Protein Length | 971 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185607 |
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| Protein GI | 219130934 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0698106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACCATGGTA GTGGAAGCTA TCAAAACCAA ACCACGACGC CGTCGTGGTT CCAAATCGGA
AAGTAGGCAA CACAGTCAAA GCGAGAGCGC CGCGGTGGAA AGTTCGTCAA CGTATCAGCC
GCACAGTACC TTGCTGATTC AACTGAACGA AGATGCCCCA ACCTGGTACC GCCTCGGCAA
CAAGCAGTAC GCGGAAGAGC GAGACGCTAC CACCGCATCC AATCCACCCG AAAAGGGACA
ACGAGTTAGC AAAGATCTCG TTCTAAAGTA TCGGGCCCTG GGAGACGCAA TCTATCGACG
GGAGGTGCAG CTCTTTGGCA AGGAATCAAA CACTTCGGAT GATCGATGGG TAGAGTCCAC
CATGAAGAAA GGTACACTCA AGGATCGCGT CGCTGCTATG AGTGTGGTCG TTAGCACTGA
TCCGGTACAT AAGTTCTACG TATTGGATGG ACTGTTGAAC ATGGCGGGCT GTTCCGATTC
GAATTCTTCG ACTCAAACAA ATTCTCGTGT GGCTCAGCTT GCTGCAGAAG CACTGGAAGA
CCTCTTCGTT AACACCTTTC TACCGAATCG GCGCAAACTG ATATCAATGG AACAACGTCC
CCTATACCTG TACGAGAGCG AAGGCGTAAA GAACACGACG AAAAAGACCC TGTCCCCGCG
GATTCTTCTT CTATGGCGCT TCGAAGAAAT GGTCAAGGCC AAGTATCATC TGTTTCTACG
TCAATACGTA TCCCTAATAC TTCGAGAAGG AACGGAGTTA CAAAAAATTC CAACTATTCG
TCTTGCTGCA GTTCTTTTGC GTTCCATTCC AGAAGGAGAA TCTACATTGT TACCAGTAAT
TGTCAATAAA CTTGGCGACC CAGCCAAAAA AGTTTCGGCT GGCGCTGCCT TTGAGCTACG
AAAACTTCTC CAACAGCATA CAGCTATGCA AGTGATTGTG GCGCGAGAAG TGCAACAGCT
TGCTCACCGA CCACATCTAT CATCACGGGC TTTATATAAT TGTATCACCT TTTTGAACCA
GCTGAAATTA AAACGGGAAG AGACTCAAGG GGGAGCCGAC GAAGCGACCG AGCCGTCACT
ACCTGCGTCT CTGATCAGCA CGTACTTTCG TTTGTTCGAA CTTGCCGTAC AAAAACCTAA
AAAAAAGGAA ACAGCGAATG AGGAAGAGGC AGGAATGAAA TCTCGACTTT TATCGGCACT
GCTGACAGGC GTGAATCGAG CCCACCCCTA TTTGCCTCAT CATGATTCAA CAATGGAACA
GCACATCGAT GCCCTCTACC GGGTCGTGCA TACAGCACCG GCCGCTGCCA CGACACAGGC
GCTACTACTG CTTTTTCACT TGTCCGTTGG TGCGGAATTC GAACAGGACC AGCGACAAAC
GATTTCGCGC AAATTACGCC CTGAAGAGCA TGCCCGCCGT GATCGCTTCT ATCGAGCCTT
GTATTCAACG CTGGCGCAGC CCTCCCTTTT GGGTACCGGC AAACACCTTA CAATGTTCTT
CAATCTTCTT TACAAAGCCA TGAAATATGA CAATGACCAA ACTCGCGTGG TTGCATTCGC
GAAACGTATT TTATGTACAA CCATTCACTG TTCTTCATCG GTAGTTGCTG GTTCTCTTTT
TCTGCTTAAC GAAATAACGA AACACCACGG GAACCTACTA TCCTGCTTTC AAGATGTCTT
GGAAGGATCC GACGCTTTTC GTGTTTTGGA TCCAACCAAA CGAGAACCTC GCGGTGCTTT
AGTCTTATCG GAGTATGTCG ATGCACCTGA AATAGCTTCC GAAGAAAACG AACAATCAAT
CGAGAAAGCT ATAACGAAAG CTCCGCTGTG GGAATTGACG TTGTTGTTGA AACATTTTCA
CCCATCGGTC TCAAGGTTCG CCAGTGCAAT TGGGAACATT GACTACAGTG GCGACCCTTT
GCGCGATTTT GGTGTGGGAC CGTTCCTGGA TAAGTTCGCT TACCGTAATC CAAAGTCGAT
TGATCGGGTA GCTGGCAAAT TTCAACGCGG TGAGAGCGTG GCAGAGCGAA AGAGTGGTAC
TGGGCTTTTG GTAGAGTCAC AGGTTGCGCT ACCTCTGAAT GACCCAAGCT TTTTAAGCAA
TCCCAACGTC GACGCACCTG ATGACTTTTT CCACAAATTC TTTTTGGAGC AAGCTCGGCG
TGACAAACTC AAAGGCATTG TCCGGCATAA ACCAAAAGTT GATGCTGTAG AACATTTGGA
GGAAGATGCT TTTGACGAGG CCGAAGTAGC AACTTTGGAC GTACAAAAAT TTGATGATTT
GGAGCAAGGC TGGGAAACCG ATGATGATGA GGAGGCCTAT GTCGACGCTT TGGCACAAAA
AATTATCGAA GACTCGATTA ACGAAAACGG GCCCGCGGAT CTTGACGAGG AAGATCCAGA
TATGGAAGGT TGGGGGGATA TGTATAGTGA TGAAGAACTA GAGGATGAGA GCGACGACGA
AAGTGAGTCG TCACAGAAGG GCAAAGCCCT GACCAGAAAC GACACCATTG TAGGCGACGG
TATCAAAGAT CTTGACAGCG AAGAAAATGA TGTCGATGCG TTCATGGATA TTGACGGAGC
CGATAGTAGC GTAAGTGACG ATGACGAGCT GTTCATGGAC GAGCAGTTGG TGTTGATGAG
TGTCGACTTG GATGGTTTGG ATTCGTCGGA CGACCACATC TCCGACAGCG GTGTGGATGG
CAACTTGACG TTGATAAATG AAGAGAAATC TAATGACGGC GAAGTTGTCG AGGAAGGAGC
CTCGTTGAAC CATACAGTAG AGGGATTAGC CACCTTTGTA GATGCTGATG AATATGAAGC
AATGATAACG AAATCCTGGA ACGAGAAAAA GCGCTCGAGA AAACGAATCG ATGGAAAAAG
TGACCATGCA AGAGCGACTT CACCAAAGAG AAGGATGTAA ATATTGCATA GCTTACAACA
GCTAAATCAC CACCGTGCAG TAC
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| Protein sequence | MVVEAIKTKP RRRRGSKSES RQHSQSESAA VESSSTYQPH STLLIQLNED APTWYRLGNK
QYAEERDATT ASNPPEKGQR VSKDLVLKYR ALGDAIYRRE VQLFGKESNT SDDRWVESTM
KKGTLKDRVA AMSVVVSTDP VHKFYVLDGL LNMAGCSDSN SSTQTNSRVA QLAAEALEDL
FVNTFLPNRR KLISMEQRPL YLYESEGVKN TTKKTLSPRI LLLWRFEEMV KAKYHLFLRQ
YVSLILREGT ELQKIPTIRL AAVLLRSIPE GESTLLPVIV NKLGDPAKKV SAGAAFELRK
LLQQHTAMQV IVAREVQQLA HRPHLSSRAL YNCITFLNQL KLKREETQGG ADEATEPSLP
ASLISTYFRL FELAVQKPKK KETANEEEAG MKSRLLSALL TGVNRAHPYL PHHDSTMEQH
IDALYRVVHT APAAATTQAL LLLFHLSVGA EFEQDQRQTI SRKLRPEEHA RRDRFYRALY
STLAQPSLLG TGKHLTMFFN LLYKAMKYDN DQTRVVAFAK RILCTTIHCS SSVVAGSLFL
LNEITKHHGN LLSCFQDVLE GSDAFRVLDP TKREPRGALV LSEYVDAPEI ASEENEQSIE
KAITKAPLWE LTLLLKHFHP SVSRFASAIG NIDYSGDPLR DFGVGPFLDK FAYRNPKSID
RVAGKFQRGE SVAERKSGTG LLVESQVALP LNDPSFLSNP NVDAPDDFFH KFFLEQARRD
KLKGIVRHKP KVDAVEHLEE DAFDEAEVAT LDVQKFDDLE QGWETDDDEE AYVDALAQKI
IEDSINENGP ADLDEEDPDM EGWGDMYSDE ELEDESDDES ESSQKGKALT RNDTIVGDGI
KDLDSEENDV DAFMDIDGAD SSVSDDDELF MDEQLVLMSV DLDGLDSSDD HISDSGVDGN
LTLINEEKSN DGEVVEEGAS LNHTVEGLAT FVDADEYEAM ITKSWNEKKR SRKRIDGKSD
HARATSPKRR M
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