| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50586 |
|---|
| Symbol | |
|---|
| ID | 7199406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011699 |
|---|
| Strand | - |
|---|
| Start bp | 210608 |
|---|
| End bp | 211789 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185543 |
|---|
| Protein GI | 219130797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.616621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAC ATTTGCTTGA ACGAACAACA GCGTGGTTGA CGACTTGGAG TCTCATTCTG
CTCGTGGCCG TTGCTCAAGA AGATGTTCAC CCTGACGTAG TTGCCGTTGT TGATGTTGCT
GGAGGTGTAC GACCGACACC ACTTTGGGCA AGCAGTTATT CGGACGGCGA GAATTGCTAC
TGCCTTCCTT CGTTGGATAG CGCCATTGGG AACTTTGTCG TAGAAACGCC ATTAGGGTGG
CTGACGACGC AGGAAGTGTG CGATCTGCTA GGAACAGGAC CAGGAAGACT AGGACAACCC
CTTTACAATG ATATCCAATG CGGTAACGGC CCCCCAAACG CTGATGAAAA CGAATTCCTT
TGTCCGGGAC GAACCGATGT AAGTGATTGC GAGGAAAAAG CCGAGCGCTG TCCACTAGTA
GAAACAAATA TATCTCAACG GCAAGCTTTG TACTGATTCG CTCTTCCTCA GATTGGGGAA
ACAGGTTGTG GTCAAATAGG ACCCAAATGG AATTTTGATA ATGCAAACCT TGCGGACGGC
CCCCCACGAC TTCCATCGTT GCCTGAGGAC ATTCATCCCG ATATCGTTGC GGTGATCGAC
GTTGTGGGTG GTGTGACGCC GAATGGAAGA TCGTGGGCCG ACAGCTATTC CTTTGGCAAC
AAGTGCTATT GTGCGACAAC GTTTGATCAC GACATTGCGG ACGTGCTAGT CGAAACACCG
CAGGGATGGA TGACGATCCG TCAAGCTTGC GAGTTACTTG GACCGGGTCC CGGTATTGAA
GGACGACCGG TGTACAATGA CATACAGTGC GGGAATGGAC CACCTAATAA TGCAGGCGAT
GAGCACGTGT GTCCTGGACG AACCGATGTA CGTCGACTGG AACGCGGTAG ACTGGCTAGT
ATTTTCAGAC CGTTGTTTTC TCGGACTGTT TATAATGAAA TGCCTCACCA TGATGCTTCT
CCGTTGTACA ATTCACAGCT TGGACCAGAA GGTTGTGGTC AGATTGGTCC CCGTTGGAAT
TTTGATGCCA TCAAATCATT ACCGCCAGGC AGCGCCCCCA CAGCTCTGCC CTCTTCTTTA
GCAGCCGGAG CAGTGCCTGT CCCAATGCTA CGGGGCTTAG GGGTAATCAC CGGATATCTG
TTCTGTGTTT TGAACTGGCA ACTTTTTGAT CTCGTTCCGT GA
|
|---|
| Protein sequence | MKQHLLERTT AWLTTWSLIL LVAVAQEDVH PDVVAVVDVA GGVRPTPLWA SSYSDGENCY
CLPSLDSAIG NFVVETPLGW LTTQEVCDLL GTGPGRLGQP LYNDIQCGNG PPNADENEFL
CPGRTDIGET GCGQIGPKWN FDNANLADGP PRLPSLPEDI HPDIVAVIDV VGGVTPNGRS
WADSYSFGNK CYCATTFDHD IADVLVETPQ GWMTIRQACE LLGPGPGIEG RPVYNDIQCG
NGPPNNAGDE HVCPGRTDVR RLERGRLASI FRPLFSRTVY NEMPHHDASP LYNSQLGPEG
CGQIGPRWNF DAIKSLPPGS APTALPSSLA AGAVPVPMLR GLGVITGYLF CVLNWQLFDL
VP
|
|---|
| |