Gene PHATRDRAFT_50570 details

Gene Information

• Locus tag: PHATRDRAFT_50570
• ID: 7199412
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011699
• Strand: -
• Start bp: 151706
• End bp: 153994
• Gene Length: 2289 bp
• Protein Length: 633 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002185531
• Protein GI: 219130772

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCATCGAAT TCAGTTACTA TCCTCAACAA GGAGCGCACA CTTACTCAAT CAACAGCAAA 
GTACTCTAGA TATAGCTCGA TAGGATGACG GTAGTGGAGG AGCTTAACGT TCTCGAAGCG 
GCCTCTTGGC CCGATTCATT GCCGCATCCG GATGCGGACT TTGTGTTCTC CGTGGTGTGT 
GAAACCTCCC ACTGCCGATG GTGTGTCCTT GCGAAGGATC CGGACGATGG AACGCTTTCG 
CCAACTATAT TCTGGAAGTA AGATCAAATC TCACAGAGCA ACCCAATTTC CTCCCTGTTC 
TCGTTCGATT TGGTTCTCAC CTTTCTTTCC GTTTGGTTTG TGTGGTGTGT TCGGTGCAGA 
ACGTCCCCCG TTTCCGCAAA CGACATGTCC GATGATTCAT CTCGAATCCT GCTAAAGTAC 
CTTCCAGACA AGGTCAAGGA ATACATATAC GGCGTAGACT CTCACACATA TACTCGGGAA 
CGCGCTCGGG AGTACTCGAA CGCCCGGCGT ATTCCCATTC TTCACCTGTA CCTTATCTCC 
ACCAACAGCG CGCACGAGAA AGGGATTGCC TTTTTGTTTC GGGATATTCC TTCCCGCATT 
ATCCGTTTGA ACAATGTGGA TTTTTTTACG CCTCAACAAG GATGCTTCAA GACGATGGGG 
GTAGAACGAG CAGCAGCAGC CCGAGCCGCG GCAGGTCTGT ACGGATACCC CTGTTTGGTT 
CTTGACGGCG GCACCATGCT CACGTACACG GCGGTCGACG TGCATGGCCA ATTACAAGGT 
GGAGGAATTT GCCAAGGACT AGGTCTTCGT CTCAAGTCCT TGGCACGCTA CACGGGGAAG 
CTCCCGGCAA TTAAAGTCGA AACGGCTTTG GCCATTATCG AGAGTAGGCG AAACTCGAAC 
CAACCCTTTG GTTTGTTTGC CACCCGCACC GAAGACGCTA TCCTCGGAAC GATCGTAAGA 
GAACTGGCGT TCCTGTTGCG AAATGTCGTG GATGAATGGG TCGCGCAAGC CAAGGAAATG 
CTAGAAACCG TTCCCAGGGA GACCACAAAC GGTAACGCGC AAAAATACAA TGGGGAACTC 
GTTGTGTGTA TCACGGGTGG TGATTGCGAT CTTATAGGGA AACTGCTGCA ACCAAATTTT 
GGCAATATTA TAGCCACGGG CACATCCACA AGAAGCGATG CATTCATGTC GAATGAATTG 
GCTGCACATA CCAAGCTCAG TGTAAACAAA CAATTGCTAC ACCAAGCACT CCCGGCGCTC 
GTCGTCGAAA AGGCACATAA TGGTACCAGC GAGTTTGATG ACATTCGAAC AGCACTGATT 
GGACAGCGCG TTGCCGCGAA ACTCGACAAA GACGGAAACA TTTATCGAGG CACGATCGCT 
TCATGTCAGC TGGATGTTGA TTTTGCCAAA GATGCGTACA GAATCCGTTA TGATGACGAT 
CGTGGAGACA TGGACTTGGC ACAACTGCAC GGTACGTTTC TAATTTGTGT CGAGCTGGGG 
ACACTTTCTT TGCAATACCA AAATGACTTA ACAACTACGC ATTCCATTGC AGCCGCCCTG 
TTACTCTACG TAAAAATTGG AGAAGAAAAG GACTCGGAGG ATGACACTAT TCGTGAATCT 
CAGGAAGAGA AACGGCGCGG GGCCAAAAAG GCTGCTGAAC GGTTGTGCGA AGAGTTGTCC 
ATACTACGCC CGGTGCCTAC TACCCCAGTT AAAGATCTCA CCACTTCCGC CGAAGATATT 
TTTAATGCAG CAGTGGCCGT TGGAAGCACT GGGCGGGAGG AGATGTCTCA GACGGTAAAA 
TCAAGTCATA TGAACATTCC AGACCCTCTT GATGTTAGTG TTGATGAGGA AGCGGTAGGG 
GTGGAAGCCG CCGGGGAAAA GCGAGAAAGG AATCTACGAA TGCCTTCGCC GCCAAATTCG 
AGAGTGCAAA AGAAACGCAA AGTGGGTGAA GACCTCATTG GCTCTCGAGT TGCCAAATTC 
TTTGACAAGG AGTTGTACTT CGGAACAGTG GCCAAATTTC TACCCGCAGA AATGGTCGAG 
GAAAAAGTTG ACGTTTGGGT GATTGAGTAT GATGACGGCG ATGTGGAAGA CTTTGATGCT 
TCAGAATTGA AAAAGCACTC GGCGTTGTAT AAGAGACGTC AGGGAGAAGA TTTAAAACCA 
ACGCTGTAAA ATCATCAAGT GAATTTAAAG TTCCGCAGAC GGAGGGTGAC CGACATACGC 
AAAGCGCTTT TGAGTTTGGC CTGGATGTTA TTATATAAAA TTGAAGCAAA CTAATAGGGG 
GTTTTCGGT 

 

Protein sequence

MTVVEELNVL EAASWPDSLP HPDADFVFSV VCETSHCRWC VLAKDPDDGT LSPTIFWKTS 
PVSANDMSDD SSRILLKYLP DKVKEYIYGV DSHTYTRERA REYSNARRIP ILHLYLISTN 
SAHEKGIAFL FRDIPSRIIR LNNVDFFTPQ QGCFKTMGVE RAAAARAAAG LYGYPCLVLD 
GGTMLTYTAV DVHGQLQGGG ICQGLGLRLK SLARYTGKLP AIKVETALAI IESRRNSNQP 
FGLFATRTED AILGTIVREL AFLLRNVVDE WVAQAKEMLE TVPRETTNGN AQKYNGELVV 
CITGGDCDLI GKLLQPNFGN IIATGTSTRS DAFMSNELAA HTKLSVNKQL LHQALPALVV 
EKAHNGTSEF DDIRTALIGQ RVAAKLDKDG NIYRGTIASC QLDVDFAKDA YRIRYDDDRG 
DMDLAQLHAA LLLYVKIGEE KDSEDDTIRE SQEEKRRGAK KAAERLCEEL SILRPVPTTP 
VKDLTTSAED IFNAAVAVGS TGREEMSQTV KSSHMNIPDP LDVSVDEEAV GVEAAGEKRE 
RNLRMPSPPN SRVQKKRKVG EDLIGSRVAK FFDKELYFGT VAKFLPAEMV EEKVDVWVIE 
YDDGDVEDFD ASELKKHSAL YKRRQGEDLK PTL