Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50545 |
Symbol | |
ID | 7199347 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | - |
Start bp | 74640 |
End bp | 75326 |
Gene Length | 687 bp |
Protein Length | 202 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185515 |
Protein GI | 219130738 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.748479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCTC CGTTCACAAC CGCCGCGGCG CTGATCCTCA CCAGTCTCTG GTCCACTACT CGCTACTACG GCGAGGCCTA TTCCGTCCCC TTTTTCGCCA CACGCCGGTC TGCGCTCACC ATGAAACGCG GTCGCGGGAG TCTCGGACGT GAAGTCGGTG GGCGTCCGTC ACCCGCCAAC AACAGCAACA ACAGCAACGG GACCGAGTTT GGGCTCGTCA CTCAACTGGT GTCCCATCCC GGCTGGACAA ACCTTACCCA CTACCGAAGG CAAGGTCGGG TTCCTCGATA CCAACCTACC CACCATGAAG AACGGCAACA CCAATCCGAC CGGAGCGGTG GCCGCCGTCC GCTACGACGA CAACATCTAC TGCTTCGCCA GTGCCTGTCC TTCCTGTCAG GTACCCCTCT CCAAGGCCAA GATACTCCCC GCCAACGAAG AAACGAAACA GCGGGCGCCG CGATTGACGT GTGACTTTTG CAAAGCCACG TACAGTTTGG GTGACGGATC CAAACTGCAA ACGACCGAAT CGGGAGGTAT TCTCGGTGGC GTCGTCAAGT CCATTTTTGC TTCGCAAAGT TCCGGGCCAC TCAAACTTTA CAAGTTGGGA GAGCAAAAGG GAAAACTGTT GATTGTCGTA GATTAGTGAC AACCACGATG ACATACCGAG TAGTAATATT GGTACTA
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Protein sequence | MHSPFTTAAA LILTSLWSTT RYYGEAYSVP FFATRRSALT MKRGRGSLGR EVATGPSLGS SLNWCPIPAG QTLPTTEGKV GFLDTNLPTM KNGNTNPTGA VAAVRYDDNI YCFASACPSC QVPLSKAKIL PANEETKQRA PRLTCDFCKA TYSLGDGSKL QTTESGGILG GVVKSIFASQ SSGPLKLYKL GEQKGKLLIV VD
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