Gene PHATRDRAFT_50494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50494 
Symbol 
ID7199327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp210043 
End bp210688 
Gene Length646 bp 
Protein Length149 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185447 
Protein GI219130594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAGTCGATA CATTCCCGGA GCTTCACGTT GACTAGCACA GAATGAAGAG TTCTCTTTCT 
TTCGGAACCC TGGCGGTCCT CGCCTTGAAT CTCTCCGTGG CTGCCAAAGC AGTGCCAAAC
AGCGACAATC TGGACGCCCT GGAAATCGAT CCTAGTCGTC GTCTGAAGTC CTCCAAGTCG
TCGAAGTCAT CCAAATCCTC CAGTAGCAAG AATACATCTG CTCCTCTCCC GGTTCCTGTG
CCAACGACCA ATCCTTCGGG CATGCCTTCG ACCGTCCCTA CCGTGGCGCC ACCTACCGAC
GCTCCCGTAC TCGCGACTCC GGCCCCTACC GACGCTCCCG TGCTCGCGAC TCCGGCCCCT
ACCGACGCTC CCGTGCTAAC GACTCCGGTA CCTACCACCG CCCCCGACCT CGCTACCATC
GCCCCCACTT CCAGTAGCAA GAGCAGCAAG AGTAGCAAAA ACGGCAAGTC CATGATGAAA
AGAGGACGTT GAAAACTCAA TTGGGTCCGA CTGTTACCTG TTGGATATTG GTGCTATTGG
AACGTTTTAG AACCACAATG AACCGTGCGG AGTTCCGGAA GCGCGTCTAC TTAAGCCCCT
CGAAGTAAAT CCTTGGGACT TTAGTAAATT CATTCCTATG ACACAT
 
Protein sequence
MKSSLSFGTL AVLALNLSVA AKAVPNSDNL DALEIDPSRR LKSSKSSKSS KSSSSKNTSA 
PLPVPVPTTN PSGMPSTVPT VAPPTDAPVL ATPAPTDAPV LATPAPTDAP VLTTPVPTTA
PDLATIAPTS SSKSSKSSKN GKSMMKRGR