| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50470 |
|---|
| Symbol | |
|---|
| ID | 7199316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011698 |
|---|
| Strand | + |
|---|
| Start bp | 151581 |
|---|
| End bp | 153313 |
|---|
| Gene Length | 1733 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185388 |
|---|
| Protein GI | 219130471 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.904967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAAGAAAGGA ATGGCACCCC ACGGCCCTTT CTCCTGTACT ACTCTCTAGC TAGAAACGTC
CCCAACACTG CTTCGTATAT ACCAAAGTTC GCTACAGTTA CAGGCGTTTG CCACAGCATG
GTAAAGGCAA AAAAGAGTAA AAAATCCAAG CCCCGAAAAG AGGCGGCTTC CAACAACGGT
ACAGTGGTCT ACACTCCCAG TAGCAGTCAC GTCTCCGCTG TATCCGGTTC CTACAAGGGC
ACCAAGGAAG ACCTCGATGC ACTCGATTGG TTGCGGAACG TCGAAAACCG CCGGAGTCAG
GGCGAGCCAG TTTTGCAGCT CGAGTATCAG GAAGACGATG TGCTGATGAC GACACTGCAG
GACTTTTTGG AAACGTCGGC GGCGACGCAC GAAGTGATTG ACGAAATATA TCAAATTTGG
CAGCAGACCG TCCTATCGAC CTTGCTTGCC AGCTCGGCTT TGTGGAAACA GGAAACCGTG
CAAGCGAATG ATCAGCGCGT ACTGAAAGAT TGTTTGAAAA CGGCGAGGTA TAAAATTAAC
TTTGCACTGC ATCACGTCCT GGGAGCGATT CTGACGTCGC CGGAACCCAA ATGGAAACGC
CTACAGCCCT ACGTGATTGA TGTGTGTTGG CAAACGCTGG CGTTGTTACC ACGACTGGCC
GAGTCGGTAC CACATCATCC CACGGATCTG AGATCTAACA TTCTGCACTT TGAGGGCAAA
GAATTCCTAG CATCGGTCGC CTGTGAAACC TGGGACACAT TGTACGACTT CGACATTTCC
TTAGATCCGA CCCGATTCGT ACCCATTCTA CGTAAACTCG CCATGTTGGA CATTTTAGAC
AAGGACTGGA ACATGCTCGG TGGGTGGGAG GACATACTGA AAGGGTTGGA GGCGAAATGT
TTCCACGGAT CGGTGCTGCG GTTACCCTGC GATAGTGTTC TGCACGAGCA CACGACGTTG
TTGCGGAACG CCCGCAACTC AATGCAGTGC AAATTCTTTT CCGTCCGCTT CATGCGGTAT
ACCGAAGACC AGGCACCACA GCGGTGGCGA TACTTTCCCA AATGCGCCGC CCCGGCCTGT
GCGCACGTGG AAACGCCCGA ATCGCCCCAT CCGCACCGGT GTGAAAGCTG TTGGTATTTT
CATTACTGCA GTCCGGCCTG TCAGGAATAC TGCGACGTGG TCCTGGGTCT GCATCCAAAA
TTCTGCCGTG ATACACCGGC TAATAAGGCG GCATCGTGTC AGCGTGAGAC CGAGGCGTAT
TTGGGATGGA GCGATCCCCA ATCCGGACAA CCACTGGTGT GTCACGCCTG CGGAGTGGTA
CAAGAAGAGG TCAGTGGTGC CGACAGCCTC GTGGATGCAC AGTACGCCAT CGTGAGCAAT
GGAATACCGA CATCCAGTAT GAAGAGGTGT TCCAAGTGTC AAAAGGTGTA TTATTGCAGT
CGACAGTGCC AAGAATGGGA TTGGCGTGTT GGGGGGCACA AGCGAGTTTG TCTCTTTGAG
GCTGCCCAAA AGCAACAGCA GCAAATAAAA GAGTTGAACT GAAAAGGGAA GCATGAGATC
AGCAATGTCG CAATGGCTCT TACATCAAAA ACGTTCAAAG CTTTTTACTT TTCCAAAGTC
TCGTATTTGG GAGCAAGTTG GATGCTCCTT TTGGCTATAG CCGTAGGGAG AGGCCCAGTG
AGATAGCTAG GTTGGTAGTT TCTTGTTTCT AAGATAGCCG AACGACACTC ATA
|
|---|
| Protein sequence | MVKAKKSKKS KPRKEAASNN GTVVYTPSSS HVSAVSGSYK GTKEDLDALD WLRNVENRRS
QGEPVLQLEY QEDDVLMTTL QDFLETSAAT HEVIDEIYQI WQQTVLSTLL ASSALWKQET
VQANDQRVLK DCLKTARYKI NFALHHVLGA ILTSPEPKWK RLQPYVIDVC WQTLALLPRL
AESVPHHPTD LRSNILHFEG KEFLASVACE TWDTLYDFDI SLDPTRFVPI LRKLAMLDIL
DKDWNMLGGW EDILKGLEAK CFHGSVLRLP CDSVLHEHTT LLRNARNSMQ CKFFSVRFMR
YTEDQAPQRW RYFPKCAAPA CAHVETPESP HPHRCESCWY FHYCSPACQE YCDVVLGLHP
KFCRDTPANK AASCQRETEA YLGWSDPQSG QPLVCHACGV VQEEVSGADS LVDAQYAIVS
NGIPTSSMKR CSKCQKVYYC SRQCQEWDWR VGGHKRVCLF EAAQKQQQQI KELN
|
|---|
| |