Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50425 |
Symbol | |
ID | 7199173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011697 |
Strand | + |
Start bp | 322002 |
End bp | 323731 |
Gene Length | 1730 bp |
Protein Length | 509 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185309 |
Protein GI | 219130307 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCTAATATAC CATTCTACCA TTACACATAG ACCACAGTCA AAACCATTTA TCATGGCGAG TTTTAACTTT GGGAGTAGCG GAGGAAGTGG TACGAACAAT AGCGCTCCGG GGGGAAACAG TAGCAGTAGA AGCGGCGGTG GCTTTTCGTT CGGTGGCTCC TCGTCCACAC CCGCACCAGC TCCAGCGGCT GGAGGCTTTT CGTTCGGCGC GGGCGTTGGT GCCACCGGCG GTGCTGGATC CACTTCCGCA CCGGCGTTTG GGAGTAGCAG TGGTGGGGGG TTTGCGTTCG GGGCGCCATC GACGGGTAGT AGTACGCCAA CGCCAGCTCC AGCATCGGGT GGTACAGTGA GCAGTACCGG AGGGTCCGGC GCCGGTGCTT TTAGCTTTGG AACGCCCGCG GTAGCTTCCA ACACTACCGC AGCACCGGCT TCGGGTACTG GTTTTTCCTT CGGGGCTACA CCAGTAACCG CCAAGACGAG TGACAGTAAC CAGAAGCCTG CTCCATCACA GTCAATGGGA AGTGGTTTTA ACTTCGGTGG CGCCCCATCC ACGAAACAGC CAGCGAGTAC CAGTACTTCC AGTGGAGGAG GAGGAGGTTT TTCTCTCAGC AGTTCGGGTA CCAGTGATCC GTTGCCTACT TTGGGACAAA ACTCTGATAG TGATAAGCAT AAGAGCACCA CTGGTGGATT TACTTTTGGA GACAGTAAAA CACCAGCAGC AGCATCTGCG TTTACCGGAA GCGATGGCAA GGCTGCATCG AACCCCGAAG GTGGCGCTTC TACGAGTGGA TTTTCCTTTG GAGGCGCTAC CGCGGCTCCG GCACCGGTAG CGGCTGCCTC GACGCCCCAA CCCGAAGCAA AATCGTCCAG TTTTTCCTTT GGGGGGTCCA CGCCGGCTCC GGTCAGTACA CCGACACCGG CAACTCCGAA AGATCCAGTC ACTCCCGCGC CTGTACCGAC CCCGGGACAA ACTGCGGCTC CCGCACCGAC AATTACAGCT CCTAGCACAG AACCCGTCAA ACTCGAGTAT CAAACTCTCA CGGTCGAAGA AACCCTCAAC GTCTTTCAAA AGGAATTGGA AAAGGATGCG CTTGCGTATG TTGCCGAAGC CCTTCGAGTT GCTGAGTACG ACGCGATTTT ACGGGATTCG CAACGAGACA TGGCGAAACT CGCGCAACAG ACGCAGCGAT GCCTGGTGCA GCAGGAAGAA GTCGAACGTG TGCTCACGGG CATTGCAGCC TATCAAACCG AATTGGACGG TACTTTAGAA ACGATCGAAA CCCACGTGGA CGAGCTCTTT CAAGCTCAAG GCGCTTTGGC CACGGTCGAT GCCGATTTGG AACGGGAACG CGCCTACAGT ACGGCGGAAG CCATCACGAC GCGTTTTCAA ACACTGCACC GTTCGCTCCA GGAAACGGCG CTCACGCTGG ACGATACCCG AACCCGCGTA CTACAGGGGG ATGTCGGACA GATAGTCAAG ATTCTGAGCC AACATCAAAC CAGTTTGACC GAGTTGGAAA CGGTCGGGCG TCGGGTAGAA CGCGACATTG CGGAAGTGCA GAAAGCTTTG CAGCAGCACT AACACCACAC AGCCTTGCGT GACATCAAAG ACAAGCTTCT CCTAGTGATG ATTGGATGGC CGAGAGAAGT ACGGTGAGCG AATTGAGCAA TAAGTTGCAT ACCTAGCTGT TGCTTTGAAA AGAAGTAATA CTATAAGCTC CAAACCAAGC
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Protein sequence | MASFNFGSSG GSGTNNSAPG GNSSSRSGGG FSFGGSSSTP APAPAAGGFS FGAGVGATGG AGSTSAPAFG SSSGGGFAFG APSTGSSTPT PAPASGGTVS STGGSGAGAF SFGTPAVASN TTAAPASGTG FSFGATPVTA KTSDSNQKPA PSQSMGSGFN FGGAPSTKQP ASTSTSSGGG GGFSLSSSGT SDPLPTLGQN SDSDKHKSTT GGFTFGDSKT PAAASAFTGS DGKAASNPEG GASTSGFSFG GATAAPAPVA AASTPQPEAK SSSFSFGGST PAPVSTPTPA TPKDPVTPAP VPTPGQTAAP APTITAPSTE PVKLEYQTLT VEETLNVFQK ELEKDALAYV AEALRVAEYD AILRDSQRDM AKLAQQTQRC LVQQEEVERV LTGIAAYQTE LDGTLETIET HVDELFQAQG ALATVDADLE RERAYSTAEA ITTRFQTLHR SLQETALTLD DTRTRVLQGD VGQIVKILSQ HQTSLTELET VGRRVERDIA EVQKALQQH
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