Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50236 |
Symbol | |
ID | 7199014 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | + |
Start bp | 67765 |
End bp | 68909 |
Gene Length | 1145 bp |
Protein Length | 264 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185117 |
Protein GI | 219129904 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGGAAAGCAC AATCCCACAC GTTGATATCC CACACTCTTC ACATACCCCC GTATCTGCTT CATCATGGCC ACCAAGTTTG CTGATCTCTC CAAGGGTCCC AAGGGTAGGT AGTCAAAGTC GCAGCCGAAG AATGGATTGA AAGGACCCAA GAAATTTTGA TATTTTCGTC ACACGAAACC TCTGTGCTTG ACTACGAATA CCGTGTTCCC GAAGTCGAGT CGGCTTGCCA TTTAGGTTTT GCCAGAATGA GAAAGGACCT GTCTATACCG AGTGCTTGAT CTTACATTTA CCGTTATCCT CTTTTGGCAG ATCTCTTGAA TGACGACTAC ACGTCTTCTG TCGTGCTCAA GGCCAAGAAG AACGCCGGAC CTGTTGCCGT TACCATCGAA ACAACCCGCG GAGACGATGG TGCACTCACG TCCAAGGTCG GCACTAAGTT CGCTTACGCT AAATTCAACG TTGACAAGGG CCAGATCAAG GCCGATGGTG GCCGAGTCTT GGAGACATCC CTGAAGGTTA CACCGGAGGT CAAGCTTTCC TTTTTGGCTA GCAAAGGTGC TGACTTGGGA GTGGATTACA CCAAGGGCAA CTTCTACGGA ACCGGTGTTT TGGACGTTAT GGACATGTCC TTGGTTAGCA CGTCGGCTTG CTACGGTTTG AACTCGGGAC TCAAAGTTGG CGGAGATGCC GCCTACAACC TTTCCGGAAG CAAGGGTCTC AGTGGATTCA ACGTCGGTGC CTCATACACC GCTGGACCGC TGTTTACCTC TCTCACGGTC TCCTCGAAAT CCGCCGCGAC CATTGGCCTT CTCTACAAGG TCAATAGCGA CCTTATGCTG GCGTCTCAAA CGGTCCATAC CTCAAACAAG GTCTGCGACG TTTTGGGAGT CGGTGCTGCC TTTAAGGCCC CTGTCGGTAC CATCAAGGCC AAGTTCAACA GCGGAGGTGT TGTGTCGGCC TGTTTGATCA GGGAAATTGC GCCGAAGGTT GTCATGACGG CCTCGGGTTC CGTCACCGGT GCGGACTTTT CGACCTTTAA ACCAGGTTTC CAGATTGCCA TGTAAACATG ACGTGTAACG AAGAACAAAG TATCGCAATT GCGATATGAG ATTTTAAAAA TTGTGCGTTA CGAAATTGCT TTGAT
|
Protein sequence | MATKFADLSK GPKDLLNDDY TSSVVLKAKK NAGPVAVTIE TTRGDDGALT SKVGTKFAYA KFNVDKGQIK ADGGRVLETS LKVTPEVKLS FLASKGADLG VDYTKGNFYG TGVLDVMDMS LVSTSACYGL NSGLKVGGDA AYNLSGSKGL SGFNVGASYT AGPLFTSLTV SSKSAATIGL LYKVNSDLML ASQTVHTSNK VCDVLGVGAA FKAPVGTIKA KFNSGGVVSA CLIREIAPKV VMTASGSVTG ADFSTFKPGF QIAM
|
| |