Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50226 |
Symbol | |
ID | 7199007 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | + |
Start bp | 45509 |
End bp | 46191 |
Gene Length | 683 bp |
Protein Length | 195 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185111 |
Protein GI | 219129891 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCCCG TCGAAGAAAA GAAGGAGACG TTCGATGTTC GCGGCGGAAT CCGTTTCGGA GCAGGCGTAG CTTACACGGA CGAGTACGGG GGTCCGACGC CATCCGCGGA GAGCGACGAT TACGTTGCCG AGCTTCCCAC AGAGGAAGAA GAGCGAGCCA TGATTCTTGG GCAGGAAGAA TTGATGGATG AAGGGAGAGC CCTTCATCAC CCCAGTACCA TGTCGGCGCT CCGTAAACAG GTACGTGGGC AAACCCTTGT CGGCTGGAAT AGTCGCGCCT GCTTTGCTCT CCCGGGACGC GCCTCTCAAC ACACAGTTTC TCCTTACTTT TTGTTCAGGG AGAAGCGGGC GAAAACGAAG ACCCATTCAC CAATCACGAA TCGGGATCTG GGTTAGTGAA CACCAGAATT TCGGATCGCG AATCGTCGTA CCAATCGCGG AGAAACAATC GCTTGATTCT AGAAGATGGT GTTTCGTTTA AGGACGCCAT GAAGCAAGCA AATATCGAAA AGGAACGCGA CGAGCTTGTT CGGGAGGTTC AAAAAAGTCT AAAAGAAAAC GACGACCTAA CGCGTCAGGA GCTTGGGGAG ACGGCTTCGA CACGGCGTCG AAAGCGAAGA TGGGACACTA GTGGTTCGGA GGATAACGAA GCTCCAACAA CAGTTGCACC GGACACGGCG ATG
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Protein sequence | MAPVEEKKET FDVRGGIRFG AGVAYTDEYG GPTPSAESDD YVAELPTEEE ERAMILGQEE LMDEGRALHH PSTMSALRKQ GEAGENEDPF TNHESGSGLV NTRISDRESS YQSRRNNRLI LEDGVSFKDA MKQANIEKER DELVREVQKS LKENDDLTRQ ELGETASTRR RKRRWDTSGS EDNEAPTTVA PDTAM
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