Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50214 |
Symbol | |
ID | 7199000 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | + |
Start bp | 9387 |
End bp | 10868 |
Gene Length | 1482 bp |
Protein Length | 383 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185104 |
Protein GI | 219129876 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.120018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCACCGCCGT TCATTTCAGC GAGTTCGTGC CCAGCCGCTC CCGAAAACTA ACCAAAACCA CGAGACAACA ATCTCAAATT TTTGGTCGTC CATTTACGTG AAGCAATGAA AATCTACGGT AAACTCCTGG CTGTCTGTGT CTTTCAAACT AACGTTTGGG GGACCAACGC CTTTGTCGCT CAGAAGCCGA AGGCGCTCGC TTTCAAGGGA ACGGACTCGC AATGGCAAAC ATTTTCGTAC GTTGAAAGCC TAGGGGGTGG GGCCTCCGAC CCGTATTCGT CCGGTTCCAA GCTTGCGAGC AGCGAAGGCG CGTCGGCTGA TAAAGACGTC ATGGATAAAA GAGGCGTTGC AAGCGGCAGC CCAGCTGTAA GTAAACCAAA GTCATCTTCT TTCCAAAAGA ATACAATCTC ACGTGATCTA TTGTCGAAAC ACACCCCAGA ACGTAATGGA AGCGCGTCTT GCTTCTCTCG AGAAACAAAA AAAATCTGAT TCGCAGTCGA GCTCCCAAAG TGGACCCATG TCAACCAAGA AGATTTGGGA TAGTACCTCC TCCGTAACTG TTCAAGGAGG ATCCCTCAAG ACATGGTCTT TCCCTAACCC CTCTGTTGAG AGAGTGCAGG TTGTGATGAA CACAGAAGGT CGTCCGCTGG ATGCCGACAT CGAATTGTGG CAGGGACCTG ATAACACTCC GTACAAAATG CGCGTGTACG TTGAGGACGG TAGCTTGCGC CCATTTCGCG CAGTGATTGA AACTCCGCGC GGACCCAATA CGATCGCGAT TCGCAACACG GGTCACCTTG AATTCCCCTT AGCCGCTTAC GTGATGGCTG GCTCGGCGGA CAATGGATTT GTTGCCAAGA CAACTGAAGA GACCATTCCC AGAGTAATCC AGGGAGGAGC CCTTCGCACA TACCCTTTCG ATCCCACTGT CGAAAGCGTG CAAGTTGCTT TGCGAACGGA TGGACGCCCC CTTAACGTGA GAATCGAGCT GTTGCAGGGG CCCAACAACA ACAAGCAGGT GATGGAACTC TACACTGAAG ACGGAATGGA CCGTCCATTC TTCTGTGTTA TTGAGACACC GGGAAGTGGA AACGTTGTGC GAGTTGTCAA TACAGCCACA ATGGAGTTCC CTATGACCGC TTTGGTTGAG GCTTATCAAG TCAGTAACGG AAACTCCGCC TCTAATCCAG TGATTGGAGG AGGAAGCGGT TACATGGATC GTGCGTGGTA AGATGGATCG AGGGAAGACC TTGGTGACTA AGGGACAATT TTCCTTTTTT TTAGCGCTGT CCGCAGGATA GGTCCTTCTG AAGATTATGG GATGCAGGGC CTGCAGGCTG AAGAACTAAA AGTAACTTTT ACAGTGAGTA ACAAATATTC CTTGTCAAAG CGATTTATAT TAGTATCCCT AGAGTGCCAT TCTATTTGCT TGAGGTTTGC CTATTGAACT AATTGTAGAC CTTGCGAAGT TGCATGATCT GA
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Protein sequence | MKIYGKLLAV CVFQTNVWGT NAFVAQKPKA LAFKGTDSQW QTFSYVESLG GGASDPYSSG SKLASSEGAS ADKDVMDKRG VASGSPANVM EARLASLEKQ KKSDSQSSSQ SGPMSTKKIW DSTSSVTVQG GSLKTWSFPN PSVERVQVVM NTEGRPLDAD IELWQGPDNT PYKMRVYVED GSLRPFRAVI ETPRGPNTIA IRNTGHLEFP LAAYVMAGSA DNGFVAKTTE ETIPRVIQGG ALRTYPFDPT VESVQVALRT DGRPLNVRIE LLQGPNNNKQ VMELYTEDGM DRPFFCVIET PGSGNVVRVV NTATMEFPMT ALVEAYQVSN GNSASNPVIG GGSGYMDRAC AVRRIGPSED YGMQGLQAEE LKVTFTTLRS CMI
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