Gene PHATRDRAFT_50133 details

Gene Information

• Locus tag: PHATRDRAFT_50133
• ID: 7198931
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: -
• Start bp: 149512
• End bp: 151789
• Gene Length: 2278 bp
• Protein Length: 629 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002185059
• Protein GI: 219129781

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.157977
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCCGCCCCA CAGTCGCGAT ATCTACCAAC AAGAGATTCG CTCGTCCCCC AATCAGCGCT 
CCAGTCGTGG TGGTGATTTT GCGGATCCAT CATCATTACA GTGTAGGCCA AAACGGTCCA 
GAATATTATA TTTTACACTT TGGTGGAATC CACACCTTAT CCCCAGAATC TTTGGTACCC 
GCATCGTAAC AACGAGACCA TGATGTCGTT GACGACTCAT CTTACGACGA GCTGTTCCTC 
CTTTACCTTT GAGAACGATG CGGACGCCTT GTTCGCGAAC ACTACCGGAA CACTGTTCAC 
CGTGGGGATC GCGTGGTGCG CAATTGCGGC AACGTACGTC ACAATCATTG TAAGGATCTT 
ACGGAGTGAT CGTCTTTCGT CCTGGAGGGA ACTGTGGAAG GTCCCGGCTT CGTTGCCGCT 
GTGTATCGCG TCCTTTTCCC ACGCCGCGTG TCCCCGACGC CGATCGCGTT GGTTCAAGTG 
CACCCAACGG GGTCGATCCT CATTGTCCGG GATGGCACTC TGTGAAATGA GCTGTCCACT 
CCAACGTGCC GCCGCCTTTT ACAAACTGCA TCTGCCCCCA CCGTTGCCCT GGACGTGTCG 
GCGTAGAGCG AATCGATTGC GTCAAGAACA AGAGCAACAA GCAGCAATAG CAAAGGTACT 
CCCAGAGCCG TCTCCCTCGG ACCAGGATTC CTCCGTTTCC AGTAGGGAGT CTTTGGTGTC 
CCACACCTCA GTAGAATGCG CGCAAGCCGA AACCTCTACG ACAACCCTTA CTACAACAAC 
AAGTACAATA ACTACAAGCT CCTCCACGTC CCACACAACT CCATCCCCGC GTACGTCCCA 
CCGCCCGCCT TCACGAACCC GCATTCCCGT GAGCTCGCTT TTGGACATGG CGCGCATGCA 
ACAGTGGCAG ACCATTGTGG CGGCGGCTCC CCTCCACCGC CGTGACGCGA AACAACGCGA 
CGCTGACGGC CTCTACCCAC TCCATTGGGC CTGTTCGGGT GGACCCACCT TGTCAGTCGT 
ACAAACCTTG CTCGATGCCT ACCCCTCCGC CGCACGCAAA CGAGATACCG AAGGATCCAC 
ACCCTTGCAC TTTGCCTCGT GTTATTCAGC ATCCACCGCC ATCCACCAAA CACTCCTTGG 
TGTGTACCCC CAAGCCGCCT CACTCCCGGA TCGCTACGGA CGTCTCCCTC TCTACCACGC 
TGTCGAGCAC AATGCCGGTA AGGCCGTCTT GGAAGCTCTC GTGCACGTCG ACGCCGCTAG 
TGTTACCCAG CCCTGTCTAC CACCCCATCC CTTACACCCG GTGCCACTCG TGAACGGCAA 
CCGTGTGTGG GCCACACGCA CACCACTCTT TGTGGCTTGG GCCAACCTGG ACCGACCCGC 
CAAGCTTTCC TTTCGCGGCA AGCGCTGGGA CAAGGCACAG TATCTTCTAC GCACGGCCTA 
CCAACATCAC GGACACCCTG GTACCGGTAC CGGGTACAAT TTCATACGAG CCGTCATTGC 
TATGGATTTG TACCTCCCTG AACCTATTCT GGACATGGCC ATCCAGGCGC GTCCGGAACT 
TCTCCGGGAA CGGGACGAGA CTGGTTCCTA CGTTTTGCAT CAGGCCGCCG CGACGCTGAC 
GCATTCCCCG CAACGTGCCC GTGATGTCTT GCACTCCGTG TTGGACGCTT TTCCCGCCGC 
CGCACGCGTC CGGGACAACT ACGGCCGATC GCCATTGGCC ATCGCCTTGG CGTCCGGGAA 
AGTCTGGAAG GACAGTGCCG TGCAAGCGCT CTGGCAGGCT GCACCGGAAG CCCTCGCGTG 
GCGCGATGGG AAGACCGGGT TGCCGCCAGT GCTCGTGGCC GCCACGGCAA TGGCGCCCCT 
CTGGACCGGA ACGGAGGAGT CGTCTTTTGC TGCGCTGGGA AACGATCCGT GTGGCTTGCT 
GACGGGCAAA CAACAGGAAT TATTGCGGCG TCGGTCGTTG TCGAGTGCGG AAACGAATCG 
AGCGAAGCAC CAGTACGGAA CAGGCGATCC CGACGTGGAC GCACTCGAAA CTGTCTATTC 
TCTCTTGCAA GCCGACCCCA GCGTCCTCGT CACGGCGACT CGAAGATGAA ATGGCGTTGC 
CGTTTTTCTC CTTTTGTCAT TTACCTTTTT TCTTTTTCTC CACACTTTTT ATACTCCATA 
GTATACACAC GCGCACGGTC ATTCTTGGCA ACGGACTTTT CATAGCCCCC AAATTGAAAC 
AGTTGGCGCT CTGGTTAATG GCATTGCCAG TAGCAGTAAA AACGGACTCT ACTACCGC 

 

Protein sequence

MMSLTTHLTT SCSSFTFEND ADALFANTTG TLFTVGIAWC AIAATYVTII VRILRSDRLS 
SWRELWKVPA SLPLCIASFS HAACPRRRSR WFKCTQRGRS SLSGMALCEM SCPLQRAAAF 
YKLHLPPPLP WTCRRRANRL RQEQEQQAAI AKVLPEPSPS DQDSSVSSRE SLVSHTSVEC 
AQAETSTTTL TTTTSTITTS SSTSHTTPSP RTSHRPPSRT RIPVSSLLDM ARMQQWQTIV 
AAAPLHRRDA KQRDADGLYP LHWACSGGPT LSVVQTLLDA YPSAARKRDT EGSTPLHFAS 
CYSASTAIHQ TLLGVYPQAA SLPDRYGRLP LYHAVEHNAG KAVLEALVHV DAASVTQPCL 
PPHPLHPVPL VNGNRVWATR TPLFVAWANL DRPAKLSFRG KRWDKAQYLL RTAYQHHGHP 
GTGTGYNFIR AVIAMDLYLP EPILDMAIQA RPELLRERDE TGSYVLHQAA ATLTHSPQRA 
RDVLHSVLDA FPAAARVRDN YGRSPLAIAL ASGKVWKDSA VQALWQAAPE ALAWRDGKTG 
LPPVLVAATA MAPLWTGTEE SSFAALGNDP CGLLTGKQQE LLRRRSLSSA ETNRAKHQYG 
TGDPDVDALE TVYSLLQADP SVLVTATRR