Gene PHATRDRAFT_50034 details

Gene Information

• Locus tag: PHATRDRAFT_50034
• ID: 7198730
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: -
• Start bp: 210577
• End bp: 212796
• Gene Length: 2220 bp
• Protein Length: 547 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184916
• Protein GI: 219129480

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0110404
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGGTTGGGTT TACGCGTTTT CGTCTTTACG GAGGAGCGCA TTGTTGGAAT CTTGAAAAGC 
CATTCGGTCT CTTCTCTGAA CGCTGTCGAT TCTGTTTCTT TAATCGGATA GGCTGTCTTC 
CAAGAAGTTT GCAAAGGTAG CTCAATTGAG GAAAACGGGC GGGCCCTTGA CTTGAACTAG 
GTATTCCTTC CAGTCAACAG TGCCATTAGA TCGGAACGAG GAACTGGAAT CACTCTATTC 
CTTCCGTAAA TCCCCGAGCA AAGTAAACAA TAGCTACGAC GCTGGTACGA TGAAGTACAT 
TGTGGTAACA GGTGGCGTCG TGTCGGGCTT GGGCAAGGGC GTGACGATTT CTAGTATGGG 
TCGTTTGCTC CAGGCCAGCG GTCTCCGAGT TACGGCCGTC AAGATTGACC CCTACCTGAA 
CGTGGATGCC GGGACAATGA GTCCGTTCGA ACACGGCGAA GTTTTCGTGC TGCGAGACGG 
TGGTGAATCT GATCTTGATC TGGGAAACTA CGAGCGCTTT TTGGGCATTG AACTCACCAG 
TGATCACAAT TTAACCACGG GCAAGGTCTA CCGCAAGGTG ATTCTCGCGG AACGCCGTGG 
TGACTACCTC GGTAAAACAG TGCAAGTGGT GCCGCACATT ACCGATACCA TTCAAGACTG 
GCTCGAAAAA GTCGCGTATA TTCCTGTCGA CGGTACTGGC AAAGAAGCCG ACATTTGCTT 
GATAGAAGTA GGGGGAACGG TCGGTGACAT TGAGAGTTCC GTCTTTTTGG AAGCCCTCCG 
ACAATTTCAG TTCCGGGTCG GGCACGACAA CTTTTGTCTC TGCTTCGTCT CGCTTGTTCC 
AGTCTTGAGT GACGAGCAAA AGACCAAGCC GACCCAGCAC GGAGTGCGCG ATTTGCGCTC 
ACTCGGACTC AGTCCGTCGA TTATTTTCTG CCGTTCCACG GAACCCTTGC AAGAGCCAAC 
CAAGCAAAAG ATATCCAATT TTTGCCACGT GCAAGCTAAG AACGTATTGA GTGTGCATGA 
TGTAAACAAT GTTTACTTTG TACCGGGGCT ACTGCAGGAG CAGAACTTAC ACGAGATTTT 
GGGCAAGGAA CTTTGCCTCG ATAAGCCATT AAATCCAGAT TTGGGATCAT GGACCACCAT 
GGCGCATTCA ATCGAACTAG CATCTCATAC GGTGACGATT GCCTTGATCG GGAAATACAC 
TGGGCTGCAG GATTCTTATT TGTCGGTCAT AAAGCCTTGC GTCATGCGGC AATCGCATGC 
AACGTACGTC TACAGTTGGA ATGGATTGAA GCGTCGCAGC TCGAAGACGA AAAGGAAGAA 
GGATACATTG GGAGTTGGGA CAAACTCAAG GCGTCAGACG GTGTCATTGT TCCTGGAGGG 
TTTGGACAAC GTGGCTGGGA AGGCAAAATT TTGGCCGCCA AATACTGCCG TGAGAATAGG 
AAGCCAATTC TCGGAGTTTG TCTAGGTTTC CAGGCAATGG TCGTAGAGTA CGCCAGGAAC 
GTTTTGGGAA TTGACCAAGC CGATTCAACA GAATTTGAAG AATCCACACC AGAACCTTTT 
GTTTTTTTCA TGCCCGAGAT TGACAAGGAG ACTATGGGTG GAACGATGCG ACTCGGGGCG 
CGCACCACCA AGTTTACACA CACCCTTGCC GATGGAAGTA TGAGTGTTTC GCAACGCCTC 
TACGGAGGAA AAGAAATGGT TTCGGAACGC CACCGACATC GCTACGAAGT CAATCCAGAA 
AAGGTTGATG CCGTCCACGA CGGTGGCTTG CGTTTTGTGG GCCGAGATGA GACGGGCGAG 
CGAATGGAGA TAGCAGAGTT ACCGCAATCG GAACATCCTT ACTACCTCGG ATGCCAGTTC 
CACCCAGAAT TTCTCTCTCG TCCTTTGAAA CCGAGTCCTC CATTCTACGG CTTAATCTTG 
GCAGCCACTG GTATGTTGGA GGACCACCTG CAGTCCGTAT TGTAAAACAA CGGAATCTTG 
ATTCGTCTAT ACGATCGCGT GGGCTGCCAT GTCTTTGCAA TAAAGCTTAC GATTTCATGA 
TTACGACACA GTTGGCAATA AGGATTGCAA AAGGTTAAGG AAATGGAAAA TTAAAATGGT 
TACTTCTTTC ACAGTAAGTT CAACATCTCG ACAATTGCAA ATTTGGCAAC AGTTCGGTAT 
CAACCATAGA AAAATTGGTT TGAATCACAA AATCTAACCT ATAGTGGAAA TTAGCCATTG 

 

Protein sequence

MKYIVVTGGV VSGLGKGVTI SSMGRLLQAS GLRVTAVKID PYLNVDAGTM SPFEHGEVFV 
LRDGGESDLD LGNYERFLGI ELTSDHNLTT GKVYRKVILA ERRGDYLGKT VQVVPHITDT 
IQDWLEKVAY IPVDGTGKEA DICLIEVGGT VGDIESSVFL EALRQFQFRV GHDNFCLCFV 
SLVPVLSDEQ KTKPTQHGVR DLRSLGLSPS IIFCRSTEPL QEPTKQKISN FCHVQAKNVL 
SVHDVNNVYF VPGLLQEQNL HEILGKELCL DKPLNPDLGS WTTMAHSIEL ASHTVTIALI 
GKYTGLQDSY LSVIKPCVMR QSHATYLEDE KEEGYIGSWD KLKASDGVIV PGGFGQRGWE 
GKILAAKYCR ENRKPILGVC LGFQAMVVEY ARNVLGIDQA DSTEFEESTP EPFVFFMPEI 
DKETMGGTMR LGARTTKFTH TLADGSMSVS QRLYGGKEMV SERHRHRYEV NPEKVDAVHD 
GGLRFVGRDE TGERMEIAEL PQSEHPYYLG CQFHPEFLSR PLKPSPPFYG LILAATGMLE 
DHLQSVL