Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50006 |
Symbol | |
ID | 7198783 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 115434 |
End bp | 118075 |
Gene Length | 2642 bp |
Protein Length | 735 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184892 |
Protein GI | 219129430 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.415443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCGGTAGACT TTTGCGATTC GTCGTCTGTT GCGCTCCGAG AGACAGGGCA CATACCTTCA CTGCGTCATT TCCACAATCT CGACCAGAGA GACGAGCTTC GAGACGTTGC TACTACTGTT GTTGTTACTG TGAGGTCATA TGGAGCACTC GGCCAACGGG ACGAAGAACG CGTCGGCATT CTCGACGGAA CAGACGAGAT TGTTGCCGGC ACGGGCAGTC GAGAGTCCGT CCGACAACGA CGACGAGTCG GGCTACGGTG CGGATCCCTA CGATGCGCTG GAACGACAGG TACGCCTTAC TGCTGTATCG ACGCCCTTCC TTCGGTCCCC AAGACGCCTG CTCGCACTCA TCGGTACAAC CATACTGGCG ATAGTAGTTG TGATCTACAC CGGTAGCACT ACTAGTCGTC CCCACGAAAG TAGTACTAGT AGTAGTACTC GCTCAAGCAG CCCTGTGGAG GCTGAGCATT CTCCGAAAGA AACCATGTTC TCGACTTTGT TGACATTTGC CACTCCCTGG AACGATTTGG ATTGGAAGGA CCTTCACAAT CACGACGTGT TGCTCCAAGT CTGGGACGAA TGGAAACGCT CTTTGCGTGA CGACAATCGC AAAAATCACG ACGACCGCAA CAACAACGAT GACGACCACA ACGCGATGGA CTGGTGGCAC ACCATTCGGG TGCGCGCGGA GCCGCTGCTG GGGCACGCCA AGGACAGTGT CGGGAATACC TGGCACGAGG CGGAATCGGC CGTCCAAGGA ACAACCAGTG AATGGCACGT GGGAGAAAAA CTACGTAGCG CGCAAGAGGC CACGTCCTCT TGGGCGCAGC AGACGGGACA GCAGGCCCAA AATGACGTGC GGGATTGGCA GTTAGGACTG CACCTCCAGC AAGCGGAACA CGCCGCCGCG CAGCTTTGGA ACAGTACCCT CCAAAAGGCT ACCGAAGTAT CTTCGAGCAT GAGCGCTAGC GGTGGTGCCG TGGGTAAGGA GTGGTTAGGA GACACGCAAG ATTGGCTACA CGCGGCTTGG AATGGTACCG AACAAACGGC CGAACACGCT TGGGGTACTG TGGAGGACGA AGCGCAACGC GTCGGTCCCC AGGCACGGAC ACTCTGGAAC CACACGGCAC AGACCGAAGG TGAGTGGTAC AATCACGTAA AGAACAATTT GCGACACTTT GGGTCCAAGA TTCGTGGCTG GTGGGGAGTC ACGGAGCGAG CGGCCGTCAA CGAAACCGGA GCGATGGAAG ACACCTTTCA GAATTGGTGG AAGCAGGCCA ATGGAAAGGA GCGGGCCTGG TGGAACGATA CCGTGCACGC CTATCACGTG CTGGCACAAA AATCAGAACG TGCCGAAGCT TCGTGGTGGA ACGCGACCCG CGAAACGGTG GGGCATGGCT GGAACGCCAC GACCGCCACC ACGGATGAAG CGTGGGAATC GACGCAGCGA TGGTTTCGGG CACGGGCGCA CGTAACCCAA AATCTCGAAG AACCCTTGTT GTATTTGAAC TCATCACGGG CCTACTCCTT GCTACGCAAC GCCCAATACG GCTGGTACGA AGCCAGTTCC GATTTCTTTG AGTATCAAAC CGGGTGGGAT GTTCAGATCA ATCAAGCTTA TTGCGGGGTG GCTGCTGCTG TGGCCGTTTG GAACAGTATC CGATCCAGTG TGGTTGGTGC GAACGATGCA GGGGCGGTGG AGGCCGCCAT GGACCCGTCT TACGAACCCT ACGTGTACGC AACCCAATCC AGCTTGATCC ACAATAAATG CGTCCACCAC AAAGTGATTC GACACAACGC CACCTTTGAC GGTATTCTGC ACGTTCCCGG GGGTCTCAGC CTTGTCCAAA CAGCGGATTT GCTCACTTGC ACGCTGCCGT CATCTTTGTG GACGGTGACA ACACACTACG TAGTGGCAAA CACCACAACT CTGGACGATG TACGGGCCGA CTTGCAGCAA GCCTTACTCG ATCCCAAGGC CCGGGTGTAC GTCAACTACG ATCGTTCTGT CCTCGATCAA CACGGTGGCG GGCACTTTTC TCCTTTAGGA TCCTACGCTT CCCGGGATGA CGCATTTCTG TTACTCGACG TGGCCAAATA CAAGTATCCG GTACGTTCGA AATCCCAGCC GGAGAGGCAA GAAAGCTTCT CTGTACTCAA CCACCATTCT TCTTTTTGTG GGTCGGCTTA AACAGTCTGC TTGGATTCCG GCGGCCCGAT TGTTTGCTGC CATGAGTGGG ATTGACGTCT GCGGGACTTG GGATTATCCA CACGCTCAGG ATTCTCTGCC CGTAAGCTTG TTAAAAGCCA ATTCAACGAA GGCCTACGCC CGGGCCTTGA CAAAATTAGG CTGCAAACCG TTGCCGCGGG GATATGTGAT TGTACGGTCC ATTACAGAAG ATACTGGAAA CAGATCGATC GTAGGGACAT AGGCTCTCGT GTGATGGAGT GGTTATCTTC CGATCAAAAT ATCAGTAGCG CCGAACCGCG GTGTGTCTCT GTGTCACATC AAAAACCTGT GGGAGTTGCG AACTTTTCGT CAGCCATACA GTCCTGAATT GTGAACTATT TGTAGCAAAG AGGAAAAGTA AGGTGGACCT TGTCGGATTC AGGTCGAACT AAATGTAAAC ATCGAAATCA TC
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Protein sequence | MEHSANGTKN ASAFSTEQTR LLPARAVESP SDNDDESGYG ADPYDALERQ VRLTAVSTPF LRSPRRLLAL IGTTILAIVV VIYTGSTTSR PHESSTSSST RSSSPVEAEH SPKETMFSTL LTFATPWNDL DWKDLHNHDV LLQVWDEWKR SLRDDNRKNH DDRNNNDDDH NAMDWWHTIR VRAEPLLGHA KDSVGNTWHE AESAVQGTTS EWHVGEKLRS AQEATSSWAQ QTGQQAQNDV RDWQLGLHLQ QAEHAAAQLW NSTLQKATEV SSSMSASGGA VGKEWLGDTQ DWLHAAWNGT EQTAEHAWGT VEDEAQRVGP QARTLWNHTA QTEGEWYNHV KNNLRHFGSK IRGWWGVTER AAVNETGAME DTFQNWWKQA NGKERAWWND TVHAYHVLAQ KSERAEASWW NATRETVGHG WNATTATTDE AWESTQRWFR ARAHVTQNLE EPLLYLNSSR AYSLLRNAQY GWYEASSDFF EYQTGWDVQI NQAYCGVAAA VAVWNSIRSS VVGANDAGAV EAAMDPSYEP YVYATQSSLI HNKCVHHKVI RHNATFDGIL HVPGGLSLVQ TADLLTCTLP SSLWTVTTHY VVANTTTLDD VRADLQQALL DPKARVYVNY DRSVLDQHGG GHFSPLGSYA SRDDAFLLLD VAKYKYPSAW IPAARLFAAM SGIDVCGTWD YPHAQDSLPV SLLKANSTKA YARALTKLGC KPLPRGYVIV RSITEDTGNR SIVGT
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