Gene PHATRDRAFT_49894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49894 
SymboldsCYC7 
ID7198520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp217881 
End bp219207 
Gene Length1327 bp 
Protein Length303 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184674 
Protein GI219128973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.380598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTTGAGCGA TCATAGGCCC AATTGGTGAT TGCGTCAGCA CTACCACGGA TACTAACTGT 
AACTGTAAAC CACACGCACT GGAGGCACAT CGTCGATTGA GACACGACGA TCGACGAAGC
GGCGAAACGA ACCTCAAGAC CGAACCCGTC GAGAACGGCC GGCAGAGAAG GATTGGATTC
GACCTACCGT TCCCGCAGCA ATTTTTTCTT CTTCCACGCT CGAGAAGGGT TTTTGCCTAC
CCCACTTCTC ATATATTTTT CGAACACACA AAAAACTCAC GGCCACCAAC ACTCGACTTT
GATTTCGAAA TTGCAGACAC CATGACCTGT TTGGAAACAT CAGATGACTA TGCTCCGTCG
AGCACAGAAG AGACTCTCTA CACGTTGGCA GCGATGCGAC AACAGGAGGA ATCCGGTTAT
ATGACCTGCG ATTATCTGCA TCAGCAGCAA TTCGAGTCTC CCGCGGTTCC GAATGGACCG
TTAGACCGCG TTGACGTCGA CTGCCGCAAC AAAATGTCCG CTTGGTGCTA CCAAGTCGTC
GACTTTTGCA AATTTAACCG CGAAACTGTC TCAATCTCCA TGAGTTACTT GGATCGCTAC
CTCATGAGCC CAACGGGAGC TGCTGCTCTT GCTGACCGCA AACTATTTCA GCTCGCTGCC
ATGACTTGCC TATACACAGC CGTCAAGATC CACGAACCGG AAGCCATGGA CCCGAAGCTT
GTCTCCAGTC TCAGTCGCGG TACTTACAAC AAGGCTCAGA TCGAAGAAAT GGAAGCCTCA
ATTCTGGGTG CTCTACAGTG GCGCATGAAC CCACCCACAT CGCTGGCTTT TGCACGCATG
TTTCTAGAGC TCATTCCCGA CGATGTTCTC TGTCGGACAT ACCGGGATAC CGTTTACGAT
CTCATCAAAT ACCAAACAGA GCTTGCGGTT GGCGACTACA ACTTTGTCAC GACCAAGGCA
TCAACGATCG CGTTCTGTGC CTTGCTTAAC TCTTTGGAAA GCGTGAGTCT CGACATGAAA
GTGTCGACAC AGATTTCGTT CGTGTTGAGT ACAGCGATCG ACGTGGACGC GCGAGACCAG
GTCTTGGTAC AGGTGCAGAC TTACCTGTAC CAGGCCATTT TGCATCATCC GTCGGCACTG
AACAACTTTT CAACCCCGAC AGTGTCGACG GCCAAGGCAA GCCGTAGACT GTCCGTCGAA
GTTTCGCCGC AGTCCATTTC CGCCATTCGC TGAGAACTAC GCAGTGCTTT TGGATTAGCT
GGCACCTTTC ACATATTGTA AACTACCAGA TCTGTAACGT ACTGATAGAA AGCCTTTATA
TTCAACC
 
Protein sequence
MTCLETSDDY APSSTEETLY TLAAMRQQEE SGYMTCDYLH QQQFESPAVP NGPLDRVDVD 
CRNKMSAWCY QVVDFCKFNR ETVSISMSYL DRYLMSPTGA AALADRKLFQ LAAMTCLYTA
VKIHEPEAMD PKLVSSLSRG TYNKAQIEEM EASILGALQW RMNPPTSLAF ARMFLELIPD
DVLCRTYRDT VYDLIKYQTE LAVGDYNFVT TKASTIAFCA LLNSLESVSL DMKVSTQISF
VLSTAIDVDA RDQVLVQVQT YLYQAILHHP SALNNFSTPT VSTAKASRRL SVEVSPQSIS
AIR