Gene PHATRDRAFT_49869 details

Gene Information

• Locus tag: PHATRDRAFT_49869
• ID: 7198501
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: +
• Start bp: 137612
• End bp: 139792
• Gene Length: 2181 bp
• Protein Length: 726 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002184655
• Protein GI: 219128933

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.37954
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGCTT GGCACGTTTC CGGTGCTCTT CAACAGATTG TGGGCAGTCA AAGTGTCCTT 
TCGCAAGAAC TGGTGCTGCT CCAGGCTGAC GTCGATAACG TTAACGACGA TGACGACAAC 
AACAGCAACT GCCACGACGA TAACGATAAC GACGACACTC CGGCGGAATC GGCACTCGTA 
CCGTCCTCCG AGCCATCGAC TTACACCCCG CCGTGTCCGA CTCGATCCCG GACGGTCACC 
GCCAGTATCA AGACCAAGAC CAGGCATCGA AAGCCACCAC CACCCGCCAT TGGCGTTGGC 
TCAACCGCAA CGGCAACTGC CCATACAACA ACAACAAGAA CAAAAGTCAC CGACTCAGCC 
CTCGACGCGA CGTCTCCCAT CAAGGCGGCT CGACGAATCG GTCTCGTCCT GACGCAAGAA 
GAGGAGGAAC TCTCCGATTC TGGTGACCCG ATGGATGACA ATCATCCACC GCACGGTACC 
ACCCGTGTCT CCGACCCGAC ACGATCCGCC CGGCTCGGAT CGCAACAGCC CTTTTCTTCT 
TCCAGGGCAA CCCGCCCGGT ACCAATGCCC TTTCCCGGGT CTCCCGCATC GCCCCCGGCA 
GCGTCCATTC TACCGACGAC GTACCTCGAA CTAGGACAAG GAAGCTCCGC GTCGCCACAC 
ACCAGTGGAA AGCTACCAGT CTTGGCGACT TCTCCGGAAG CGTTGTCGTC CCCACTCAAG 
CCGTGTCGTC TCTCGCAAGA GTCCCGCTCA ACGAAAGTTG AGCGTAGATC GACCGACCGG 
GAAAATTTCG AATTCTCATT CTCGCAAGAA TCGGCCGCAT CCACCAACAC CACGGATCCC 
AATCTGGGAC CGCTCCTACA CGCCATTGCC ATTCAGCAAA CCGGTCTTTC CCAGGAACCT 
TTGTTCTTCA CATCCTCTCA AGATTACGTC TATCCGACCG TGGTCCTACC GTCCCAGCTC 
TCCGAAGAAG CCGAAGAAGA AGAAGACTCC CCTTCCGACT TTTTGCTCCG TCCCCGCAAG 
TCGCGTCGGC AGCGAAAACG GAAACACGAA CCGATCGCCA GTGAAAGCGA CAACGAACCG 
TTACCACCAA CATCCAAAAA TCCAGCCAAA CGAGCTTCCA CGAGCTCCAC CAAGAAGCCA 
CCAGAAACCA AACGGGCAAT CAGCGAATCC GCCAAAGTTC TCAAGCCTAC CTCCAAGCCT 
TCCACGACAG CGCTCCCATC TACATCTCGA ACATCCACTA ACCCCGCCGC TACCACACTG 
CCGCCATCCC CCACACGATC GAACCCACCA TCAGGAAATC ACTCTTCCGA CCTTTCTCGG 
CTCCAAAGCC AGCCATCCGC TCAAACGCAA CAATCGCCAT GCCCCACGAC ATGGTCCGTA 
AGCTATTCCA TTCCCAGTCC GAACTCGGCT GGGCAGAAGA GCAAAAACAA TATCAAGAAC 
AATATCAAGA ACGACGCCCA ACTCAGGCAA AGCAGCACTG CGTCCGCGGG CGCTACCGGA 
CCGACTCCGG AAGTACAAAA GGCGGCACAA TTGGCCGCAC GGGTCCTACA TGATCCCGAC 
TTGGCCAAGG CTCTCTTGTT GCGCATGGCG TTGGTCCGGG AATCACCCCG CCCCGCATCT 
CAGCGCGTCG ATCCGCCTCC CGGAACCATC CTTGCGGAGC ACTTTGTCTG GGCCAAGTTT 
CCTTCTCTCG AGAACGTTTT GAAACTCCAC ATGCTGGACT ACTACCAACT CTCCATGAGC 
AGTTGTCAAT CCAACGCGCA ACAAGAGTAC AATAACCGCC TCGTGACGAT TATTCGCGGT 
CACGTGTATC GCAAGGGCTG GACGTTTTGT GATCGATACC GGAACTCGAC GGAGGTGAAA 
CCACTCCGGG ACCGTATTCG GTGTTACTAC AAGACGCACA TTCAGAACGC CAAGAAGCGG 
TTGCGAACAA TGTTGCGCAA TCCGACAAAA AAAGCGAGTG CGAAGCACTT GGTCGCGCAC 
TACGATTTGA TTCAGGAAAC GGTGGAGACG AGCGGCAAGG TCCAAGCCGT GGCGGAAACG 
TACGGCTCGG CTGCGAGCCA CTCGCCACCA CGGGGGAAAA AGTCCCCGAA GCGACGAATC 
GAGGCGTCGT CGCGACGGAA TAAGGAAGCG AGTGAGGACT CTCTTAGTGA CGAGGAAGAA 
AGGGCAACGC TTCTTGTTTG A 

 

Protein sequence

MRAWHVSGAL QQIVGSQSVL SQELVLLQAD VDNVNDDDDN NSNCHDDNDN DDTPAESALV 
PSSEPSTYTP PCPTRSRTVT ASIKTKTRHR KPPPPAIGVG STATATAHTT TTRTKVTDSA 
LDATSPIKAA RRIGLVLTQE EEELSDSGDP MDDNHPPHGT TRVSDPTRSA RLGSQQPFSS 
SRATRPVPMP FPGSPASPPA ASILPTTYLE LGQGSSASPH TSGKLPVLAT SPEALSSPLK 
PCRLSQESRS TKVERRSTDR ENFEFSFSQE SAASTNTTDP NLGPLLHAIA IQQTGLSQEP 
LFFTSSQDYV YPTVVLPSQL SEEAEEEEDS PSDFLLRPRK SRRQRKRKHE PIASESDNEP 
LPPTSKNPAK RASTSSTKKP PETKRAISES AKVLKPTSKP STTALPSTSR TSTNPAATTL 
PPSPTRSNPP SGNHSSDLSR LQSQPSAQTQ QSPCPTTWSV SYSIPSPNSA GQKSKNNIKN 
NIKNDAQLRQ SSTASAGATG PTPEVQKAAQ LAARVLHDPD LAKALLLRMA LVRESPRPAS 
QRVDPPPGTI LAEHFVWAKF PSLENVLKLH MLDYYQLSMS SCQSNAQQEY NNRLVTIIRG 
HVYRKGWTFC DRYRNSTEVK PLRDRIRCYY KTHIQNAKKR LRTMLRNPTK KASAKHLVAH 
YDLIQETVET SGKVQAVAET YGSAASHSPP RGKKSPKRRI EASSRRNKEA SEDSLSDEEE 
RATLLV