Gene PHATRDRAFT_49814 details

Gene Information

• Locus tag: PHATRDRAFT_49814
• ID: 7198383
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 426592
• End bp: 432771
• Gene Length: 6180 bp
• Protein Length: 2034 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002184542
• Protein GI: 219128695

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0269237
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCGTT TGCTTGTTGT CTCTATCACT CCTAAAGAGA GTACGCACTG GACCATTTCC 
TTTCATACCT TCGATCTATT CAAAACAGAG ATACGGAGGA CGACCAACTT GATTGTTAGG 
GCCTGTTCAG TGCAGCTTAT TGCCGTATCG TCGTCAGAGG ACGAAAATGA AATTGCTGTA 
TGGTCGGCTA GACCGCACCC AGGTTGTCTT CTCGAAAAAG GCGGCGGAAA AGAGCATGTA 
CAGGATATCA GTTGGGATTA TTTTGTTTTT CTGTTGAGAG TTAGTCCAAA CTCAGTCGGC 
ACTACTTCAG ACAAAACCAA GATTATTGAT TTCTCTTTCC TTCGATCTGG CTTTCTAGAC 
GCATCTCCCT CTTTAATCTG CTATTCTGGC AAGAGCGTTT CGATATACCA GCGCTGCGGT 
GGCGGACGGG ACTGGGAACA AAGAACTGAA ATTTATTACT CAAACAGTCC AACCTCGTCG 
AGTACTACAA TGACTGCATC TGCTTTTGGC TCAACTGCGC CTTTTGGCGT CTACTCGAAC 
CCATTGGATG TGTTTCCTCA CATACTACCT GCCTTGCAGT GTGCCTTTGC GTCATCAGAC 
GAGAGCACCT TCTTACGCTC GGACTGGCAC CCGGACTCCT TTCTTGCAGA AATTTGTTTG 
GATGATAGAG GTGTTAAGGC TGCTTTGGAC GACCGACTGC GATCTTTGTT TTTGTGGCTT 
AGCTCCGTAG GAAAGGATTT GTCGGACGAA GATTTGGAAG GGCCTCTACG TGTAGCACCC 
CTGCTCATAG TCGAAGAAAA TTTTTCTGAA GACAGCGATG GTCAGGATCA ACCTCGAGCA 
AGACTGACTC TGCTAACGGG TCCGGCTACG GACCAAACAC TCCCTTCGCA AAATGTCGCG 
AGAGAAGTGA GTAAACTGAA GAGTTTTCGG GATATACTCT TGTGTAGCAT CGATCAGGCA 
ATTCCTGAGT CGTCTTCCAC CGTTCAGTCG CTCGATTGCG ACCTAGGCAT CAAAAAAGAA 
GAGCTCCCAC CGCTCCTACG CACATTGTCT TCTGAAGATT TGGAAATCAT TTGGGCCCTA 
TACGATATGC TGGTAAAACC GCCTTGTTTC GACAAGCTAG ATAAGCTAGG GCAGCTATTC 
CTGTTCACCA GAGAAATCTT TCATCGGCTT GCAGCTATTA CAAATAAGAT AGAAAGCTCG 
ATTTCTACAA GGATACCAAT GCCGTCAATG CATGTTAAGA TCACTTCGAA GTCCGGTGGG 
AGTCAGAGTT GCGAAGAAAC TTACGTGGCC TCCTCCGGCT GCTTGGCTGC TCTTATGAGC 
CGCTCTCAAA ATAAAATTTT GGACTGCTGC CGTGCAAATG GACATAAGTT TGACTGGCCA 
TTCGCGAGAG ACCTTCGCAT TGCATTCTGG CTGCGGTCGG ATAGGGAGCT TGCCAAGATA 
TCGGAAGAGA TCGGCCAGAC TCTTTACAGG GCCAAGAAAG AGATAATGGA ATGCGCACTA 
TTCTTTGTGA TTGCGCGAAA GACGAGAACT CTCCGAAATT TAGCAGCAGC AGATTCGACC 
GATAGTGGGA GGAAGCTATT CCAGTTTTTG ACGTCTCATG ACTTCTCTGA CGAGCGAGGT 
CGACGAGCTG CAGAAAAAAA CGCATACAGC CTTCTTCGCA AAAACAGATA TGGCATTGCA 
TCCGCGTTTT TCCTCCTTGC CGAGCCCCCT TTTCTCAAGT CAGCTCTCGA AGTGATTGTG 
ACAAAAATGC GAGACTCAGA CCTTGCTTTC GCTGTTGCGA GGCTAACGGA GAGTTCTGTT 
GCCGCCCTAC AACCCAGTCT GAATGCATCT TCCGTAGGGC TTGGAGGCAT ACTTGGAGGT 
GGAGGCGGGT ATGCCATTCC ACCCGGATCA GACTCTTCGT TGGATGGTGA GGACGGAGAA 
CGTTTTGACG ATTGGCAACC AGATCTTGGA ATGTATTCTA AGAAGCTGTT GGTGGAACGA 
TTGCTTCCTC AAGCTGAGCG AGACAATGCT CTGAGCGCTA TCCAGCTATT ATGGCTTGGT 
AAAATTGAGG AAGCGTCTTG GTGGCTATCC GGGTTCATAG AACCCAGCCA TGATAGCGAC 
ACGGGTTATC GCTTAGTCAA CGATATCGAT CACCGTGTAT TCGGAACAAG GACTGATGCG 
AAAAGACAGT GTGCTGGATC AATGAAGCTG TCGAATGCAA TTGGCAAGGT AAACTTGCTT 
GTTGACTTCA TCTCGGCTCC GCTCTTGCTT GACGCCCTGG GTGGGAGTCA GCGAGCTCAA 
TTTGCTTCAT GTTTAGCAGT TTCGAGTGCG TTGATTGCGC GGGGAGTTGA GATGCCAACT 
ATTCGCTCTC TACTACATTT AGCTGGTTCT CAAATGCTTT TGAAGCATCC CATAACTTGT 
CTAAGTCCCA GAGAGGACGC GAAACACGGT CTGTCGCCCT CGTCGGCAGC TGTGAAGCCG 
TCGATATCCA AGTCATTAAG TTCTTCCCTC CAGCCAAAGC GAAGCTGCAA TTTAGCGGTT 
GCTGCTTCCT CGGGGGTTAT GTCGTCCTCT GTTTTTGATT CGTTTGATAC ACCTCCTACC 
CACAACTCGA AAGCGAAGGT TTCAGACCAT TTTGAGAGAT CAGAAACGGT GCAGTCTTCT 
ATTTTCGATG CCTTTGATGC TCCGCCTACC CAAAATTCGA ACCCGAAGGT ATCAACCCAG 
GAAGGCAGAT CCTATGGGAT GCAATCATCC ATATTTGACT CCTTTGATCC TCCTCCTCTC 
CAGAATATAA GTGTTACGGC AGGACGTGAT GAGACATCGG GGAACATAGA GTCGTCCATT 
TTTGACTCGT TTGATGTTCA TCCCGGACCG ACTGTGAAGG GATCTGCATG CGACGATCGA 
TCCGGAGACG TGCGGTGTAC TGCCATTTCA TTTGATGACA CAAGACAATT ATTCAGCGAA 
AATGATGCCC AAGAATCGAA GGTTTTATGT CCTGTTGACA ATAGACCAAC TATTGACAAT 
CAAGAGGCGA TCAAGAAGTC CGAAATAGCG ATTTCTCTTT CAATCTGTCG GAAAGGGATC 
CCAGATTTGT GGAGCGAATG GCGTTATAAC ATGCTTTTGT TATGCGCTGG GAGGCGCCTA 
CTGCGTGAAG TGGCGAGCGT CGTAGCTCAA TTTCACGGGG ACCCGCGGCC TCAGTCAATG 
GTGTCTTTTT ATCATAGCGA ACACCCGCTT GTTCCCTCAA GGGCATCTGA AGTACTGCAG 
CTGAGATGCG ACTCCGAAAA AATAATAGGA AGAGTCAAAC GGTCTCTGGA GCAGCTTTCC 
ACAGCAAGCG GGTTAGAAAC TCTTGTTGTT GTAAGTTGCT CAGTCCAGCT TTTGGGTCAT 
TCCCAACAAC GCCGTAGAAC ACTTTTTACT GTTATTCTTT ATGCCGCAGC GCAACAAGAT 
GACATGGCTG ATCTCATCGT TCGAGCCGCT GCTTCGGATC TCATTCAAAT GGCGAAGAGT 
ATGGTGTTTT GTAACGACGT TTTTGTACTC AAACAAAAAT CGCGTTCGCA CGCATCTACA 
CAGCATATTC GGCGACTAGC GGCAAGGTTG AGTTGGCAAC TAGAAATTTG CATGTGGCTG 
CAGCGGGGTG GAGGTCTTTA CTTATCTGCA AGTACAATCA AAGATGCAAT TGCCGCTGTG 
CGAGTTGGCA TTCTCATAGC CAGCTGGAAC CGCAACACCG AATGCTTGGA AGCCATGATT 
CGAAACCAAC CAGACTGTTC TCTCGACGAC GAAGCAGGAC ATCCGCTGTG GACAAATTTA 
AAAAGCTTTA CCGCTCCCGA GAGAGAAGTA AAAAAAAACA GAAAGATCTC AAGTGGTGGA 
TGGGAGTTTT TGGTAGACTG CAGAAGAACA GAGGCGACAA AAATGCTGCG ATGTAGACCT 
ACGGGGTGCT TCATTATGAG GCCACATCCA AACGACCATG GGGTTTTCAC GCTCAGTTTT 
AAAACTAACT TAGCGAGTGA GGAGGGAATG CCTAAGGATG GCGAACAGCA GCTATCTGAT 
CATGGGGAGT TGGTGAATAG GCCTGAGCAA CCTAGTTCTA CAGTAATGTC TTCACGGGCT 
TCGAAAAGAG ACGACATAGT TCAACATGCG GTTGTCAGGT TGTCTGAATC TGGATTTCGA 
TGTGGTTCTT TTGGTCCTTT CGCTAGCCTC ATCGGTCTCC TTGAAGCCGT GTCAGCATCG 
CTCCCTTTCA ATTTGAGGTT CGATCAACCG CCAGTTGACC GGGTAATTCA AGAAGGATTC 
CAGCCTTCTC CAAATGCAGT ATTTTTCCGA AAGCTAGCCC TCAGTCATGC GGATAGCGGA 
GCTTATCCCC AGCCAGCCAA AGTACAGAGT TGTCAAGTCC CGTCTTCTCC CAAGGAGGAG 
CGAACCTCTT CGACATTCCG AACAGGGAGC GAAGATACCA GATCCGAAAA GAAGATATCT 
TTTGCCTATT TTCTCGAGCT CACGACTCTG AGCAAAATTC ATCGGCAATT AAGTGCCGTT 
GTATCAGTTC ACGTTGACGA GGCTCATCAG TCTGATGGGG AGGTCATGAC GACAGACGAA 
AGCTACGAAG CAGCGTCGGA TAGTGTTTTA TCGCTAATGA CTTTTCATGG AGTCTCCACT 
CCGTACGCTT CTTCGCGGAG GCTTCTTAGT CCTCTGATAT GTTGGGGCCG TTCTTTGGAA 
ATTCTTTCCG TGGAGTATGT AGCCCCGGAA TTGAATGGCT CTTTCGATCC CAGATTGCCA 
GTGGATTTTG AGGAGTCGGC CGAAGAAATT GAAATATTTC AGCACGAATC CGCAACTACG 
GTCGAGCAAG GGGACGCAGT ACTTCGACAA ATGATCAAAC GAGGATCTGG AGTCGATTTC 
AGTACGTTAC GCTTAAGTGA CGGTGGTGAT TGCACTATGG TTGTGGTTTT TGGAAAGAAG 
GAAGGAATCG AGTGGTTGCT TTCCAGCGGA TTAGAAGCTA GTGAAACCGG CGCTTTGAGA 
AGATTGAAGA TAATGGAGCA TGAGAATATT ATCGAACCAA TTGAAATGCA GCGACTCCCT 
CTGAAACATA AGGTACCTGA GCACGGAGAA AGTGATGTGA GATACAGGAT TGTTGACCCC 
TGGGAAGTGG AAGCGCTTCC GAATCGTGAA GGCGAGACTC GAGGAGCCTC TCTTGGCAGA 
GAAAGCTTCT CAAGGTTTAG TATAGGGCAG GTGGCACTGT CATCAGAGAG TACCCTTCGT 
GATATTGGCG GGCATTCGCT TTTAGAGCTG TGGACCAGCA CGAAAGGAGG AGTGCTTTTG 
ACAAAAGCGT TAGCTTCGAT AGATACACCT TGGGAACGTG CCGGGGCAGG AGATTTGCTT 
CCAGGAAATG GAATAATGAC CAGTGTTCCT CCGTACTTAA ATAGCATCAG GCAGCACTTG 
TACAGGAACG CGCTGTTTCG CCGCCTCGAC CTTCCGCAGC GTTTTGTTGC ACTAATGCAA 
GTGGAGTTGC TCGACCTAAA AAACTTGTCG TCTCCCGGTG GCTCAGTTTC CCTCTCAACT 
TACGCGCTGT TGCGCCTGAA ACGTGACGGC AACAGGGCGG GCTTAACCAA CAAAACACGG 
ACACTTGACA CAGCAAAGAC ACATGCCACC AAGCTTGGGA AATCTTCTGG TCCAAATGCC 
CCGGCGTCCT GGGGAAGCGT CGTTCGATTC CGTTTCCCCC TCCCTGAAGA TGTTTCTGTG 
GAAGGGTCAA GTCTCGACGA TGATCGAGAA ACACTATTCA AAGGACCCCC GTGTGTACTT 
CAGATTACAG TGTACGAAAA AAAGCTTATC GTGGATAACT CACTGGGAAC TGCAGATATT 
CGCACAGACG GCCTTTGGAG CGGAGGCCAG CTTGAGGAGT GGGTGCCTCT GCGCTCAGAT 
AAGCAAACCA TTACATGGTT TGCTCGAATC AGATTGACAC TAAGGTATGA ATTAATGTGC 
CATGCGTGCG ACGCAGTATC CATGGACACT ATAAGCGGTA CCTCAAGTGT TGGACTCCGG 
AGGATGGAGG AACTCATCCG TGCAGGTGCT TCGGCGCACG AAGATAACAA GCAAGCTACA 
AGCTCCCCGG ATTTGTTGAC ATACTTTGAG AGCATGGTGT ACTAAGAATT TGCCGCTATC 
TTATCAAAAT TGTAGACTAT ATTTAAAGCA CTAAAAAATA AGCCTCAACC AGTCCGCAGT 

 

Protein sequence

MVRLLVVSIT PKESTHWTIS FHTFDLFKTE IRRTTNLIVR ACSVQLIAVS SSEDENEIAV 
WSARPHPGCL LEKGGGKEHV QDISWDYFVF LLRVSPNSVG TTSDKTKIID FSFLRSGFLD 
ASPSLICYSG KSVSIYQRCG GGRDWEQRTE IYYSNSPTSS STTMTASAFG STAPFGVYSN 
PLDVFPHILP ALQCAFASSD ESTFLRSDWH PDSFLAEICL DDRGVKAALD DRLRSLFLWL 
SSVGKDLSDE DLEGPLRVAP LLIVEENFSE DSDGQDQPRA RLTLLTGPAT DQTLPSQNVA 
REVSKLKSFR DILLCSIDQA IPESSSTVQS LDCDLGIKKE ELPPLLRTLS SEDLEIIWAL 
YDMLVKPPCF DKLDKLGQLF LFTREIFHRL AAITNKIESS ISTRIPMPSM HVKITSKSGG 
SQSCEETYVA SSGCLAALMS RSQNKILDCC RANGHKFDWP FARDLRIAFW LRSDRELAKI 
SEEIGQTLYR AKKEIMECAL FFVIARKTRT LRNLAAADST DSGRKLFQFL TSHDFSDERG 
RRAAEKNAYS LLRKNRYGIA SAFFLLAEPP FLKSALEVIV TKMRDSDLAF AVARLTESSV 
AALQPSLNAS SVGLGGILGG GGGYAIPPGS DSSLDGEDGE RFDDWQPDLG MYSKKLLVER 
LLPQAERDNA LSAIQLLWLG KIEEASWWLS GFIEPSHDSD TGYRLVNDID HRVFGTRTDA 
KRQCAGSMKL SNAIGKVNLL VDFISAPLLL DALGGSQRAQ FASCLAVSSA LIARGVEMPT 
IRSLLHLAGS QMLLKHPITC LSPREDAKHG LSPSSAAVKP SISKSLSSSL QPKRSCNLAV 
AASSGVMSSS VFDSFDTPPT HNSKAKVSDH FERSETVQSS IFDAFDAPPT QNSNPKVSTQ 
EGRSYGMQSS IFDSFDPPPL QNISVTAGRD ETSGNIESSI FDSFDVHPGP TVKGSACDDR 
SGDVRCTAIS FDDTRQLFSE NDAQESKVLC PVDNRPTIDN QEAIKKSEIA ISLSICRKGI 
PDLWSEWRYN MLLLCAGRRL LREVASVVAQ FHGDPRPQSM VSFYHSEHPL VPSRASEVLQ 
LRCDSEKIIG RVKRSLEQLS TASGLETLVV VSCSVQLLGH SQQRRRTLFT VILYAAAQQD 
DMADLIVRAA ASDLIQMAKS MVFCNDVFVL KQKSRSHAST QHIRRLAARL SWQLEICMWL 
QRGGGLYLSA STIKDAIAAV RVGILIASWN RNTECLEAMI RNQPDCSLDD EAGHPLWTNL 
KSFTAPEREV KKNRKISSGG WEFLVDCRRT EATKMLRCRP TGCFIMRPHP NDHGVFTLSF 
KTNLASEEGM PKDGEQQLSD HGELVNRPEQ PSSTVMSSRA SKRDDIVQHA VVRLSESGFR 
CGSFGPFASL IGLLEAVSAS LPFNLRFDQP PVDRVIQEGF QPSPNAVFFR KLALSHADSG 
AYPQPAKVQS CQVPSSPKEE RTSSTFRTGS EDTRSEKKIS FAYFLELTTL SKIHRQLSAV 
VSVHVDEAHQ SDGEVMTTDE SYEAASDSVL SLMTFHGVST PYASSRRLLS PLICWGRSLE 
ILSVEYVAPE LNGSFDPRLP VDFEESAEEI EIFQHESATT VEQGDAVLRQ MIKRGSGVDF 
STLRLSDGGD CTMVVVFGKK EGIEWLLSSG LEASETGALR RLKIMEHENI IEPIEMQRLP 
LKHKVPEHGE SDVRYRIVDP WEVEALPNRE GETRGASLGR ESFSRFSIGQ VALSSESTLR 
DIGGHSLLEL WTSTKGGVLL TKALASIDTP WERAGAGDLL PGNGIMTSVP PYLNSIRQHL 
YRNALFRRLD LPQRFVALMQ VELLDLKNLS SPGGSVSLST YALLRLKRDG NRAGLTNKTR 
TLDTAKTHAT KLGKSSGPNA PASWGSVVRF RFPLPEDVSV EGSSLDDDRE TLFKGPPCVL 
QITVYEKKLI VDNSLGTADI RTDGLWSGGQ LEEWVPLRSD KQTITWFARI RLTLRYELMC 
HACDAVSMDT ISGTSSVGLR RMEELIRAGA SAHEDNKQAT SSPDLLTYFE SMVY