Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49783 |
Symbol | |
ID | 7198357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | + |
Start bp | 279678 |
End bp | 281258 |
Gene Length | 1581 bp |
Protein Length | 499 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184516 |
Protein GI | 219128640 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGTTTTGTA GAAATGCTCG TCACAGTTCT TGATAAGAGT CAGAAGTCAG GCTGCTATAT TAATGTTAGT TCGTCGCCGT CATGAGCAAC TCGCGGACAA AAGAACCGAC ATGCTTGCCC GAGGATACCT TCGCCGTATT GGTGCATAAA CTCTACCAAG ACCGAGTACG AGACTTTGTA CTGAACAGAC CTGTGAATAT GCCGGATTGG CAGACAGCGT TCAGTTGCAG CAACCCATCC ATCGGAACGA AGCGGAAGCT TACATTAAAC GCGGACGAGG AGCAACAAGA TACGAGACCC CCGAAAGGCG GAAGAGAGAC CCAACCCGAA AGTAATAGAT GTGTACTATT GGACACCACT GAATTGACCG GTGTGAGTCG AGCCCGACGT GGATACGTAC TTTTGCTACT TCAGCAGACG GTCCGACCCT GCACGCAATT ACCTCCCATG GCGCGACAAA ATGTGTCCTG GGTCGCACGT ATTTCTCACC AGATGAAGAT TAACGATATG ACGACAAGTG ATGTCATGGG GCAACATCTT TGGACGACAC TGTCCGAAAA TGGGTTTGGC AGTTTTCCCC AGCAGGGCGA TCAAGACAAT CAACAATTAC AACAAGCTTT ACGCATTGAT GTTCACCCCC GCGAGTATCT GGAGCCTCTT TGTCTCCAAT TGCAGGAAGC ATGTGCCACT TGCGAAAATT CTAACTCACA CCGATCATCG TCGGTTTCCG TGGAAGGGCC GTTTGACGGA CCCGTAGCTA TGACTATGTC GGCATCCAAG TGTTCACATC GCCTATATGT GATTTTTCTG AAAGAGCCAG AGCAATCTTC GGCGAGCTTT CAAGTGTACT GGGGATTGGA AAGTCGCGAC AAGCACAAAG CGAGCATGAT GATTCGTTTG AACCAGGAGG CCTCCAGGGA GCTGGAAGTG CGCATTTGCA ATCACAAGAC AGGCGCCGAG CAGAAGCAAT CTCGCTCGGG CCCCGTTGTT ACGGATGACG CGCCACTATC CCGGGCTTAC TACAAGCTGG AGCAAGTCTG GCACGACTAC TTATCGTCCG AGCGCGAGCG GCTGTGTTTG GATCAAGGAG CCGGACTGGA CTTGGGCGCG TCGCCTGGTG GATGGACGCA GGTATTGGTG CATCTGGCGC AATTACCAAA GGTAGTGGCC GTAGACCCCG CCGCCCTGGC CGACCGTGTT CGAAAATTGT CGCACGTGAC CCACTTGGCC ACGACCTTGG AAAACGCCAA CCTACAAGCG CATGGTCCGT ACAGTATGGT CGTGTGTGAT GCGTCCGAAT TATACATGGA ACTCTTTCGG AAAATGAAAA CGTTGACTGG GAAACCGCCT TGTTGGACCT TGCCCAGCGT ATGGGTCGTG ACCATGAAGC TACCCTTTAA GAGTATTGGT AGTGTACAGC GGCACGTAAA CATCATTGAA GAATCCGCGG GCTCGCACTT ACATGAAATG GCCCTGGCTA TGTTTCCCAA GGAAAATATT AGGATCGCCT ACCGTGTCAT TCACGCCATG GCCAATTCCG ATAGCGAGCG GACGCTCATC GCTGTCTTTG AGAAGGCCTA A
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Protein sequence | MSNSRTKEPT CLPEDTFAVL VHKLYQDRVR DFVLNRPVNM PDWQTAFSCS NPSIGTKRKL TLNADEEQQD TRPPKGGRET QPESNRCVLL DTTELTGVSR ARRGYVLLLL QQTVRPCTQL PPMARQNVSW VARISHQMKI NDMTTSDVMG QHLWTTLSEN GFGSFPQQGD QDNQQLQQAL RIDVHPREYL EPLCLQLQEA CATCENSNSH RSSSVSVEGP FDGPVAMTMS ASKCSHRLYV IFLKEPEQSS ASFQVYWGLE SRDKHKASMM IRLNQEASRE LEVRICNHKT GAEQKQSRSG PVVTDDAPLS RAYYKLEQVW HDYLSSERER LCLDQGAGLD LGASPGGWTQ VLVHLAQLPK VVAVDPAALA DRVRKLSHVT HLATTLENAN LQAHGPYSMV VCDASELYME LFRKMKTLTG KPPCWTLPSV WVVTMKLPFK SIGSVQRHVN IIEESAGSHL HEMALAMFPK ENIRIAYRVI HAMANSDSER TLIAVFEKA
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