| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49772 |
|---|
| Symbol | |
|---|
| ID | 7198450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | - |
|---|
| Start bp | 251021 |
|---|
| End bp | 252769 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184591 |
|---|
| Protein GI | 219128797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTTG CTTTGTGGCT CTTTTATTTT ACCATCGCCG TGTCGGCCGA AGGAGCCAAT
CGTGTTCGAC GGCGAAATGT AAACGGTGCC GTTGTTGCTA ATTCCGACGA GGCGTCGTCG
GTTCGCCGAC ACCGCAGCGA TATTATTCTG GACCTTGCCA CTACCGTTCA CACGAGCAAC
TTTGCTACGT TGGACAAGAT CCCCCCGAGG AAGACCAAGG ATGCTACGAA TGACCGCCAA
TTGGTTGGTT GGAATCCGGC TGATATGTTT CAAGAAATCC AGCATAACCC AACAATTGTG
GGTGGCGGCG ACGCCGAGAA ATCGGACGCC CCTTGGCAAG TCATGATACT TTTTTGGGAT
GCGGCCAATA ACCGTTGGGA ACCAACTGGA TGCGCCGGTA CGCTCATTTC GGACCGTCAC
GTGTTGACCG CGGGTCACTG CGCTGTCGAC AATGGGAACC GCGACGAAGG AGTATACGTT
GGAGCCTACG AACCATTTGG TGAGAATCCG GGTGTCCCTT TTCACTTTTC ATTGATTCAA
TCACATGAGG TACATCCTGA GTTTGACAAC CGGTTGAACG ATAAGGATGC TGCCGTTCTG
ACTTTAACTA GCCCGGTCAG CACCAGCCTC TTTCCTCCGC TTCAACTGGC GGGTCCCGGG
TTTCCGATTC GAGACGGCGA CTTGCTCAAA ATTTACGGAT TTGGTCGCGT AGCGGAGGAG
GATGCGTCCG CCGTCGAGAC GCTCCAAGTA GCGCAAGTGC CGTACATTTC GTCGACTCGC
TGTAGTCGGT ACCACTCCAA TATCCGCGCC GACATGTTTT GTGCTGGGTT TTTGGACGGT
GGCGTGGACG CGTGCCAGGG CGACTCGGGT GGACCCGCAA TTCGCGAGCT CGACGGCATC
CCATACCAAG TGGGCATTGT AAGCTGGGGA GTTGGCTGTG CCCGGGCAAA CCATCCCGGT
GTGTATGCGA GTGTGGCGTA CGTACACGAA TGGATCCGTG ACACCGTTTG CGCTTCAAAA
GCGGTCGCGG GTTTTGCTTT GTGTGCTCCC TTTGGTGATG CCAATCCTGA TCTTCATCTG
GTTCCAACAG TGACTTTGGC TCCTACTCTG GCTCCTACTG TAATTCCAAC TCTGGCTCCC
ACTCTGCTTC ATACTCTGCC TCCTACTTTG CCTCCTACGC TGGCTCCTAC TTTGCCTCCA
ACGCTGGCCC CTTCTTTGCC TCCTACGCAG GCTCCGGCTC TGGCTACTAC GGTGGCTCCA
ACTATGACTC CCACAGTGAC TCCTCCCAGA GCTGCTACCG TTGCTATTCC ATTGACTCGA
ACCACGGCTC CTTCTTTGAC TCCAACCCGG GCTCCTACTT TCACTCCAAC CCCGGCTCCG
GCGTTGTCTC CTCCCGAAGA TGCTACTGTC AGTACTCCAT CGGCTCCTGC CGTGACTCCC
ACACGCGTTC CGAGCCAGCG TCCAACAGTC CTACCACTCG GGACCACTGG GACGTCGGAT
CCGAATCCCA CCCGCGGTCC GGCGACAACG CTGTTTGCGA CCACGGGTAG TACCACTTGC
GCCTTGCCGG GCCAGTCATG CCGAGACGCC CGCGGTTGTT GCAAGGGCGT GTGCCTCGCG
TCGTTGGCGG GCTGGACCTG TCCAGTCGCC AGCGCGGAAC GCGGTGTTAG CAGTAGCAGT
AGCCACAAAT TGCGCGTGCG CGAGGAATTG GTGGAAAGTC GCAAACAGAA AAAAGATAAA
CACGACTAG
|
|---|
| Protein sequence | MFLALWLFYF TIAVSAEGAN RVRRRNVNGA VVANSDEASS VRRHRSDIIL DLATTVHTSN
FATLDKIPPR KTKDATNDRQ LVGWNPADMF QEIQHNPTIV GGGDAEKSDA PWQVMILFWD
AANNRWEPTG CAGTLISDRH VLTAGHCAVD NGNRDEGVYV GAYEPFGENP GVPFHFSLIQ
SHEVHPEFDN RLNDKDAAVL TLTSPVSTSL FPPLQLAGPG FPIRDGDLLK IYGFGRVAEE
DASAVETLQV AQVPYISSTR CSRYHSNIRA DMFCAGFLDG GVDACQGDSG GPAIRELDGI
PYQVGIVSWG VGCARANHPG VYASVAYVHE WIRDTVCASK AVAGFALCAP FGDANPDLHL
VPTVTLAPTL APTVIPTLAP TLLHTLPPTL PPTLAPTLPP TLAPSLPPTQ APALATTVAP
TMTPTVTPPR AATVAIPLTR TTAPSLTPTR APTFTPTPAP ALSPPEDATV STPSAPAVTP
TRVPSQRPTV LPLGTTGTSD PNPTRGPATT LFATTGSTTC ALPGQSCRDA RGCCKGVCLA
SLAGWTCPVA SAERGVSSSS SHKLRVREEL VESRKQKKDK HD
|
|---|
| |