Gene PHATRDRAFT_49763 details

Gene Information

• Locus tag: PHATRDRAFT_49763
• ID: 7198346
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 201211
• End bp: 203325
• Gene Length: 2115 bp
• Protein Length: 594 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002184505
• Protein GI: 219128617

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCACGA TTCCCACATA TATTCCATCG GAGAGGAATT TTGAATTGAC TCGATGCCCC 
AGAAACGCTG TCTTTCTTGG CTTGGTTTGA ATCCCCGGAA AACATTCATG GAACCGCTTG 
CGTAACGAAA ACCTTCTTGT CATTTGTGCT GGCATTCCTG ACGCTGATCA TCGGCCCCAC 
AATGCAGACT GGTCTTTCAG CTATAACTCC TTTCCGGTGT GATCATGGAG CGTTGGTGCG 
ACCATTCCAC TTACGGTTTG GAGGAGGACA ATGGAAATCG ATCCAGTACA CTAGAAGGTG 
GTGAATCGGA ACGACCCAGC ATATCAGAGG GTGCAGAATC GGAACATTTT CCGTTCTTTC 
ACGATACCTT GACTTTTGCA AGAATCACGG AGGGGATGGG ACATATATTA CCTTACGCTT 
CCCAATCTGG ACAGGTAGCA GGAGAAGAAC AAAGCGCGTA TTCTCTATCC CCATACGTCC 
CGTATCCTCC ACGTAATTAC GTACGGAGAG ATTGCGAGGA AGACGACGTC GGGAGAAGAC 
CTAGGGTTCG ACGATGCCTG GATTTAAACA AAGGAGTGAA CCTCACTAGT CCCAAGCGCT 
TCAGTATTTC GCAAGACCCA TTTCTATCAA AAAATCATCC ATCGTCTCTT TCGGACGGCG 
AAGAGACAAG TCAGCATTCG AGAAAAGCAG CAGGCATTGC TTTGGAAGAG GACGCGGTAG 
GAGATATCTT TTCGAGCCGC AGCATTCGTG CTCAATACGG GTCTGATCCG ATGCAAATGA 
AAGTTCGATC CCCCCGATAT CTTCCAGAGC CGAAATCTCC ACTGGTACAC TCACAGCATT 
CAACTCCGTC ATCACATCGT CATCCTGGAA GTCACCTCTA CCAAAGCCCA GGTTTTTCAG 
GGAACTTTGC ATACTCTTCC TATCAAATGG CCTCTCCCCA CAGCTATTTC CAGAGACGAT 
ATCCCATGGT AGCTTCGCAT CCTTTCAGTG ACAACACAGG CACGCCAGGT ATTTTCATGT 
CCCAATTGCC ATGTCCTGTT TACTCGCCAC CGCAATACCC TCCACAACCA TTTATACCCC 
AACAATCTGT TCACAGCGAC ACTCCTGTAG ATGCCAATAG GATGGATAAT TCTGGTTGCA 
CGGCCACGGG ATCATCTCCA AATAGGACTC TTCCTTTCCC AAACCCGAGC TTGAGCCTAG 
CTATTCCACC TTCCCCTATA CGATTGCGCC AGAAACCGCC CGGTAAATTG AATCCGGTGC 
GTCGATCCGC CCGTTCAGAA TCCAAAATCC GGGAAGTGCG GACCCGGACG AGCTCTGGCG 
AATCGACGTC GCAAGCTGCG GGCTTGTGCG CAGCGGAAGT GGCGACGGCA GGTAGTGTGC 
GGGCGAAGGC AGCTATTGTG ACATGGTACG ATCGACTGGA CGATTTACGT CGGTTCCGGA 
AAGAGTTTGG CGATTGCAAC GTGCCTCAAA AATATGAACC AAATCGAGCT CTGGGTATTT 
GGTAAGTCTT TCGCAATAAG GACAGATGCA TGGTTGTTTT CCTTGTGCTT TCAGCTACGG 
CCTTTAACAT CTCTATTGAT GCTGCGTACG TTTCTGTGTG TTTACAGGGT CAACAAGCAG 
CGGATGGAAA AGAAGAAGCT CGACAGGGGC GAACGATCAT CCATGACTAC GGAACGACTG 
CAGGCGCTGC AGAGCGTCGG GTTTCAGTGG GCCAAGCTTA AGGGCGATGT TTCTTGGAAC 
CAGAAGTACA CAGAATTGCT GGAATACAGA TCCGTGTTCG GTGACTGTAA CGTGCCTACC 
AAGTACCGCA CCAATCCGGC GCTGGGACGC TGGGTTTCGA CTCAGCGATC GCAATTCAAA 
GAATTCCAGG CCGGTCTGGT AACGCATATA ACTGATCAGC GAATTTCCCA CCTGGAGAAG 
ATAGGCTTTC GGTGGAGCAT GATGGAGGAG GAGGAAGAGA ACAACTGCAC AAATGAAAAT 
TCGCTGAGGG ATGGTAGCGA AGCAGATGCC ATCTTTTCAA GGTCAATGCG AGTGGAGAAA 
GTAAAGCGTT GGCAATACGA CAAATCCAGA ACAAGTACCC GCCACTCTTC CATCAATCGG 
GTTACTAGTG TGTGA 

 

Protein sequence

MERWCDHSTY GLEEDNGNRS STLEGGESER PSISEGAESE HFPFFHDTLT FARITEGMGH 
ILPYASQSGQ VAGEEQSAYS LSPYVPYPPR NYVRRDCEED DVGRRPRVRR CLDLNKGVNL 
TSPKRFSISQ DPFLSKNHPS SLSDGEETSQ HSRKAAGIAL EEDAVGDIFS SRSIRAQYGS 
DPMQMKVRSP RYLPEPKSPL VHSQHSTPSS HRHPGSHLYQ SPGFSGNFAY SSYQMASPHS 
YFQRRYPMVA SHPFSDNTGT PGIFMSQLPC PVYSPPQYPP QPFIPQQSVH SDTPVDANRM 
DNSGCTATGS SPNRTLPFPN PSLSLAIPPS PIRLRQKPPG KLNPVRRSAR SESKIREVRT 
RTSSGESTSQ AAGLCAAEVA TAGSVRAKAA IVTWYDRLDD LRRFRKEFGD CNVPQKYEPN 
RALGIWVNKQ RMEKKKLDRG ERSSMTTERL QALQSVGFQW AKLKGDVSWN QKYTELLEYR 
SVFGDCNVPT KYRTNPALGR WVSTQRSQFK EFQAGLVTHI TDQRISHLEK IGFRWSMMEE 
EEENNCTNEN SLRDGSEADA IFSRSMRVEK VKRWQYDKSR TSTRHSSINR VTSV