Gene PHATRDRAFT_49745 details

Gene Information

• Locus tag: PHATRDRAFT_49745
• ID: 7198334
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 138465
• End bp: 140750
• Gene Length: 2286 bp
• Protein Length: 576 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002184493
• Protein GI: 219128592

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTCTTCTAAA CTCTACGATT GCGCTTGAAC CCAGCTCAGG CATATCGAGA TTAGTAACCG 
TGACCGCTAT TGCTTTTTGC ATTTTTTTCA TCGTTTTCAA GCATCGAATA ATTGTTGGAT 
CGTCCAATTT TTCTGGACTA GCGCAGCGCG TCAATGAAAA ATCCTCGCGA TTCAGGATCA 
CAACATTACA ATTCTGAAAA GATAATCTCG CGCTAGCATT TCATCACTAT GGACTCTGAG 
GCCTTGAACG ACTTCATCTG GGACGGACAA TGGGAAAGCG TTTATGAAGC ACTTTGTCGC 
TATATTTGCA TCAGAGGAAG TGCCAACGTT CCGATACAGT TCGTCGTGAA CGGGCTCAAG 
CTCGGCAAGT GGTTGTAGTA AGTGCATTCG TTGATATCTT TCTTTTCTTC GCAATATGTT 
GAGTTTGTGC TGCAATACCA ACGTTTACGC GTGGCAGCGT TCGGTTTTCT TTCACGCAAG 
AAATACTTTA ACCAAACCCA AGAGAAACTT ACTCAAGCCT TCGCGTCTTT TGAATTTACT 
GCTGTAGTGA ACAGAGGTGC AAATGGGGAC AAGGCAGTTT GTCTCCCAAA CAGGTCTCCA 
AACTAGTTGA AGTAGGTGTT CAACCGCTTT CCTCATTAAA CAAGATGCGA TTACCACCAA 
CGTATCCCCA GCAGTTGCCT GACCACGTTT CTAGTACTCT CCTTACTCTA CCGCCGGTTA 
GGAGAATTTC TGATGCGACT GATTGTCGTA GTCCTCCCAA AATGTCTCCT GAAAGATCTG 
ACGAAGGATG GCGATCGAGC AAATGTGTTA CTCCTCGCGA CTCTGGTAGC ACCATGGCCA 
TACCCTCGTC TTCCGCGCTG GGCGAACTAC AACGGTCTAG CTTTCTCGGT CGCAGGATGA 
TGATGCCTTC CTTAAGCTCT GTTACTGCTG CTGCAAAAGC AAGCCATCGA CGCCAACATC 
TGGAAATGAT GTTGCTGGCT GAAGAACGTC GCATCGCTCA AGAGCAGGCG TTGGCTGGTC 
AATATACAGG CTATTCGCAA GAGCACATCA GAACTGCTGG CAAATCGAAT CATTTCGCCG 
CGTACAGTGA TTTGATAATG GAGGCTCAAA ACCGCTTCGA ATTATCCGCC AACACAACAA 
GTTCATCTTC ATTTCTGCCT CGTTCCAACG ATCCAGCCTT AAGCCACCAA ATGAGTGTAC 
ATCCAGACCT CACTAGCAGC AGGCTCGGTA ATCGAGAGAA AATGGCTGCG GCTACAATGA 
ATAGGTTGCC ACCTCTGCGA GTCAATCCTC TCATGGATAT CAGCACCCCT GAGGCCCCAC 
CCGGGTGGTG CACTCGCCGA AAGAAGCAGC CTAATAAGCA CGTCATTCTT CTTCCCGAAG 
AGCCTGATGA CGACGAACAA GATCGATCGA AAATAAAGAG ACAGCTCTTT GTCAGCGTTT 
CTGATGAGAG CACGTTGTGC ACTACACCCA TGCTTCCAAA GAAAACATCA GCCCTGAACG 
CATGGGATTC TAAGCTCGTC GAGCTAGTGC GCTTCGAAAA AACCTTTGGT CACATGCTGG 
TACCACCGGA ATTTCGCACG GCCGAACACC GCCTTGGTGC CTGGGTCCGA CATTTGCGAG 
TCTTATTTGA ACAAGACAAG TCGCGCTGTG CGGTCGATCG CAAAGCCAAA CGATCACAAT 
TGTCGGGATA CCGCGTCAAA CGCCTCGATG CAGTTGGGTT CGACTGGCAC GCGACCGAAG 
AACAAGTGCA GAACAAGCGC TGGGGTGTAT ATTTTCAATT ACTCAGGGAT TTTTTCCAAA 
AAAATGGCCA CGTGAACGTG TCGGCGACTC ACAAAGTTTC CGGCATGAAA ATTGGCAATT 
GGGTTCGTCT GCAGCGAATC GCTCGCCACG AAGGCTGCTT AAATCCTGAC CAAACTTCGA 
AGCTTGACGC CCTAGGATTC GATTGGGAGT TAGAACGTGA TACTCAGAGC AGCTCAAACG 
AAAAACAGAA CCCCAATCGT CCCAGCGAGG ACGATACCAT GAGATTACTT AAACGCCGTC 
GGGAGGAACA GGAACAGCTC TCATCTGATT GCGGTCTTTC ACTCTTATCG TCCACGGCCA 
CCAAACGTAT GGTCGTTCGA AAGAACTAAG ATTTGCCAAC AGGCATACGG CCTTTTAATT 
ACATATATCC TTTTACATGA TTTTATCGTC GTCAGTCAAA TCAAATTTTG GCTGGATTAG 
CCAGTGACGA AAAAGCCGCA TTTTTGAATA TATTGACAGT CAATCTAATT TGAATAATCT 
ACTTGT 

 

Protein sequence

MDSEALNDFI WDGQWESVYE ALCRYICIRG SANVPIQFVV NGLKLGKWLY EQRCKWGQGS 
LSPKQVSKLV EVGVQPLSSL NKMRLPPTYP QQLPDHVSST LLTLPPVRRI SDATDCRSPP 
KMSPERSDEG WRSSKCVTPR DSGSTMAIPS SSALGELQRS SFLGRRMMMP SLSSVTAAAK 
ASHRRQHLEM MLLAEERRIA QEQALAGQYT GYSQEHIRTA GKSNHFAAYS DLIMEAQNRF 
ELSANTTSSS SFLPRSNDPA LSHQMSVHPD LTSSRLGNRE KMAAATMNRL PPLRVNPLMD 
ISTPEAPPGW CTRRKKQPNK HVILLPEEPD DDEQDRSKIK RQLFVSVSDE STLCTTPMLP 
KKTSALNAWD SKLVELVRFE KTFGHMLVPP EFRTAEHRLG AWVRHLRVLF EQDKSRCAVD 
RKAKRSQLSG YRVKRLDAVG FDWHATEEQV QNKRWGVYFQ LLRDFFQKNG HVNVSATHKV 
SGMKIGNWVR LQRIARHEGC LNPDQTSKLD ALGFDWELER DTQSSSNEKQ NPNRPSEDDT 
MRLLKRRREE QEQLSSDCGL SLLSSTATKR MVVRKN