| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49724 |
|---|
| Symbol | |
|---|
| ID | 7198418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | - |
|---|
| Start bp | 68640 |
|---|
| End bp | 69777 |
|---|
| Gene Length | 1138 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184563 |
|---|
| Protein GI | 219128739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0265864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GATTTTTTTG GAAAGCTCTC AATGGAAAGG AGGATCAGTT ATACGCATAA CATCCAAATA
TGCAAGTACC AACGGGTGAT TTTCGGGGTT GTCTCGCTTC ATCTTTTCTT CGTACTCTAC
CTGCTACCTC CTGCGTGCCA TTGTCTTTCT ACGCCCTTCG GCAAGACAGC CAAGAATGTG
GCGACGCAAA TTTTGCAAGG TACTGGAGAG TCAATGGTGG ACTTGAATCA GTACAATCTC
GATTCGCTGT CACGGATCGA GCAAGAATGG ACGGCTAATA TGGTCCAAAA GGTGGGCGAA
AACGAAGTGG GGTTACGGTT GGGATGCAAG TCGGACGGTG AACTTTACGT TGACATCGTG
CCTGTGGTTT TTCCTCGAAC GCAAAGCGGT TTGGGCTTGG AGCTGGTAGA ACTGGCAGGA
GGACGAGACG ACGGCCTGGG AATTACGGTG GTCTCCGGCC TTGTAGAGGG CGGTGCAGCA
ATGGAGAAAG ACATACTTCC GGGCGATTCC ATCTCGAAAG TATCAGTGGT ACGCAAGCAA
AAATCAAATC TAAACAAAAA GCAAGCAGTG GCGGAGACAA TCCAGGAAGT CTCTGTATCG
ACGGAATGCC TCGGATATGA GGCGACGGTT CGAGCGTTGC AAACGCTACC TCCTCGAACG
ACATCATCAT CTTTGAGTTC ATCCTCATCG TACGACGAAT TTTATTCGGT GTTACTCAAA
CGACTGCGCC GAAAGCCTAA AGTGACCATC AAACTGCAAT ACCCTCCTAG TCAAGAAGAC
GCTGAGGATG AAACAATTGA ACTCTTTGCA GGGGAAAACT TGAGACAAGG CATGCTCATT
CGCGGAGTCA AACTCAACGA CCCCTTGGCA AAGCGTTTTG ACAGCAAGAA CGGCGGCAAT
TGTGGCGCCG GTGGACTGTG TCGTACCTGT AGCGTGTCTG TAACAAGCGG TATCAACTTG
CTCAATCCAC AACGCCTCGC TGAAAAGCAA ATGCTGGCGG ACAATCCACG TTGGCGATTG
GCGTGCAAAG CCATAGTTGG GTTTGGCATG CAGGAGGGGG AAATGACGGT TCGCGTGAAC
CCACGACAGT GGTAAAGGGT ATTGAAAGAG TCTACCTACC ATTCTATCAT TCGTTAAC
|
|---|
| Protein sequence | MERRISYTHN IQICKYQRVI FGVVSLHLFF VLYLLPPACH CLSTPFGKTA KNVATQILQG
TGESMVDLNQ YNLDSLSRIE QEWTANMVQK VGENEVGLRL GCKSDGELYV DIVPVVFPRT
QSGLGLELVE LAGGRDDGLG ITVVSGLVEG GAAMEKDILP GDSISKVSVV RKQKSNLNKK
QAVAETIQEV SVSTECLGYE ATVRALQTLP PRTTSSSLSS SSSYDEFYSV LLKRLRRKPK
VTIKLQYPPS QEDAEDETIE LFAGENLRQG MLIRGVKLND PLAKRFDSKN GGNCGAGGLC
RTCSVSVTSG INLLNPQRLA EKQMLADNPR WRLACKAIVG FGMQEGEMTV RVNPRQW
|
|---|
| |