| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49716 |
|---|
| Symbol | |
|---|
| ID | 7198413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | - |
|---|
| Start bp | 42910 |
|---|
| End bp | 44314 |
|---|
| Gene Length | 1405 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184558 |
|---|
| Protein GI | 219128728 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTTGCACCCA CAAACTTACA GCACATACAC AGATTTAGAT TGGGCCTTTT TTCCACGGCC
CGATACACTA TTTTTGCTTC CCAACAACCT TCCCATCCAC AATTGAAGTG TACGGAAACA
AAATCGATCA CTCGTTGGCG TGCCCTTTTC CAAGCCTCAT TCTTCCATAC CACAAGCTCT
GTCCCGATCG ACCATGATTT CCCGGAATGT GCCAACCCTT CGTGCCGTTG CTTTGGCTCA
GGCAGAAGCG TATCAGCGGC CGTTGAGTGA AGAAACCGTT GCGGCCAAAG ACAGAACCGG
ACCAACTACC TTCGTTAGCT CTGGCTACGA AAGCGCGGAC GGGAGTCGCA AAAGAGCCGA
GCCAGAGGGT ATGGAATCAG GGGTTAGACG CACCAAGAGA AGGCGTCTGC AGAATGCGCA
GGGAAGCACA ATTGGTGAAG GATCACGAGC TGGCTCCTCA TGGGAAACCG GAGGTCGCGG
GGATCATCAA GCTGGCTTCA TGCAAAACGT GGATTCCGAG CTCATGTCTC AACAGAGACA
CCGTGGAGAA TCTCAGATCA CGAACAGGCC CATTTTGGAG GAGAGATTTC GCCCGGAAAC
GCGTGACCTT ACGCAAGCAC TCTCGGCTCT CGATGATTTG AACGTTTCAA ATCGACCTCG
AGAGCGCACT CAATCTTTTT CTACTCATAC TCGGGGGGCG AGCACTGTCG GACGAGCTGT
GAGGGGATCC CCGCAAGGAC TGATTGGTTT TTCTCCGGTC AGGTTGTATG CCTCGGACGA
AGCAGAAGAC CAGAGTGAAG TGAAATGCTC TATTGCTGGC GAAGAAGCCT ATTCGAGAGA
TGGTCTTCGA CCGAACGCCC GCTCTAGGCG TAACTTTACG TGCGTTCCTG CGCGGATGCC
GCCAGTATCG GCTTTAAATC GTACTGAAGA CCAAGACGAC CCTAATCCTC GGCCCGATAT
ATACGAAGTA TCCCTCACGC CTGACCCCGT CCACGGACTC GGCCTGCTAC TCGCCTGCGT
GGTGGATGGC CTGCCTTGTA TTGCTGAACA GTACAAAGTC CTCCCCAACC GGGTACTCCC
GGCCCAAGCC GCCGGAACCA TTTGTCTGGG GGATGAACTA GTGGCTGCGA ATGGCGTCGG
TCTTGACGGT CGAGCCTTCG CCTGGATTGT GGCCTACATT CGATACGTCG GACGTCAAGG
GAAGCCTATT CGCATGTGCT TTCGACGCCG GCCGACAAGG CTTGAGCTGG CCGACATGCC
CGCTGCATCG GCTTAGAGGA TGGGCGGGAC ACGAACTGTC GCTCCCTACC TGACTTCTGC
CTGGTAATTT GGAGACAGAC CGACAGCTTA GTGATCTCGC TTTCTGTATA ATTGTCACTA
CCTAACAGTT TACAGTTAAT TTTTC
|
|---|
| Protein sequence | MISRNVPTLR AVALAQAEAY QRPLSEETVA AKDRTGPTTF VSSGYESADG SRKRAEPEGM
ESGVRRTKRR RLQNAQGSTI GEGSRAGSSW ETGGRGDHQA GFMQNVDSEL MSQQRHRGES
QITNRPILEE RFRPETRDLT QALSALDDLN VSNRPRERTQ SFSTHTRGAS TVGRAVRGSP
QGLIGFSPVR LYASDEAEDQ SEVKCSIAGE EAYSRDGLRP NARSRRNFTC VPARMPPVSA
LNRTEDQDDP NPRPDIYEVS LTPDPVHGLG LLLACVVDGL PCIAEQYKVL PNRVLPAQAA
GTICLGDELV AANGVGLDGR AFAWIVAYIR YVGRQGKPIR MCFRRRPTRL ELADMPAASA
|
|---|
| |