Gene PHATRDRAFT_49706 details

Gene Information

• Locus tag: PHATRDRAFT_49706
• ID: 7198329
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: -
• Start bp: 499228
• End bp: 504166
• Gene Length: 4939 bp
• Protein Length: 1222 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002184471
• Protein GI: 219128544

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTTTCC TGATCGGTGT CGCGATTTCT AGTCGAAGGG CTGAGTATCT GGTGTCGCTG 
ATTGTTTATG GAGCTATGCC ACAACTTTGT TTGAAAGGAA AGCCCTCTCT GGAAGCACGA 
GCCAGTTTCA TCTTAGACCG ATGCCATCGG CAACCGAAAA CTGCATTCAA AAGTATCCTG 
ATGTACTCAT TCTGTGTTGC AACAGTGTTA CCCAAAGTCA TCTTTAACGC AACAAGCTTT 
GTTCACTCTG TAATTCAACA ACAGTTACGT AACGCGAAGG CTTGTAAACC GACCGCAGAG 
CGGTAAACAG AAAGGTAAAG AAAGTTAACG AAGTCGGAAT TGGAAAGCGA AGAAAGCAAA 
CCTCAGAATG GGAATGTTCG CGTCGACCAC TCGCAGACAT CACGCTTCTC TGAGGAGTGT 
TCTTTGCTTG CTGTTCTTGA CGCTTTCCGT TTCAGCGCAG ACAACGCCGC AGCGTCAAAT 
TGTATCAGAG CTCTCTCTCT GCGTGGAGGT TGCTGGAGCG AGCCAAGACG ACGGGGCGTC 
CATATTTCAA GGGAATTGTA ATGACGGTAA CAAGCACCAG GTGTTCGACT TTATTCCTGC 
TAGCGGTACA GACAACGCGT ATCATCAAAT TCGGGCTTCC CACTCCAACA AGTGCCTTGG 
TGTGGCTGAT GGGGCATTAG CACCTGGGGC TGACATAGTG CAACTGTCTT GTGTCGACAA 
CGACCCCGCT ACGCTGTGGA AGCAACGTGA TGGGGTATTG ATCTTGCAGC ACTCTGGTTA 
TTGTTTGAGT GTCGATGCCA GTTCGCGTTC CACATCAGGG GCCTTTATGG TACAATGGTT 
TTGCGACAGT CCCAGCGTCA AGTGGCAAGT TAAGACAGTA TCCGAGCAAT ATGACGGACT 
ACAGCAACTT TTGAAACGCA GCAATTTTGC GCGCAGATCC GAATCTGGAT TCTACCTCAG 
TACGGGAACG ACGCACGACA ACCAGTTTCT TACTACGAAT TCGTCTTGGT CGGAGACAGA 
AACCGATGGG GCAACTTACT CGGGGTGTGG CAGTTATGGG CAAGACACAT TTAACCGTCA 
TCGCACTGGG CCAGCCTTTG TCTTCACCAT ACCGGGGTTC GTTGCGGGCG ATACGTACGA 
CGTAACAATG GGGTTCGCTG AGATGTGGGT CCCCCAATGC CAGGACGGAA AGCGAATTAT 
GAATATCACA GTCAATGGAA GAACGTTTGC GCAAGACTTG GATGTCTATA ATGCCGCTGG 
TGGGTGCCGC ACTGCTTTGA TTCTGACCAA GTCGTTCGAG GCCAGTAGCA GAGGAGAATT 
CGTGATCGAT TTTACCAGTA CGATTCACAA CCCTATGGTT TCATTCATTC AGATACAACA 
TGTTGGAGCA AACGCTATGC AAGCCCGAAT GCTAGCAGAT GTACCGACGG CTTCGCCAAA 
TCTAAGCATC GAGCCCACGA TTGCACGAGC AACAAACGTC TCCACCATAG TTTCAGAAGG 
ATTTAGTGGA CTCTGTGTTG ATATACTTGG GGGCAGTGTA TCAGATGGTG CTCAGGCTGT 
CCAGGCATCT TGCAACGGAG GTGATAGTCA GGAGTATCAA TTCTTGATTG TTGGTGAGGG 
CCAGTTCCAA GTTGTGGCCT CTCATTCACA AAAGTGTTTG GGTGTTGCCG ACTTGGATGT 
GACAGACAGT GCCGATGTCA TTCAATTGCC GTGTACGAGC AACACCCTTT GGTACGTTGT 
TGGCGGTGGT GCATACCTAC AACTTCGCGT TCTGCATAGT GCCAAATGCT TGAGCATATT 
CGGAGCCTCG ATTGCCCCAG GTACGAAGCT TGTTCAGGAA GCCTGTGATG AAGGCCCCGA 
TCAGCTCTGG CGCGTCGCGG ACGGCCTGTT CGCAGAGGAG ACGCTGGAGC CCTCGGCGTC 
GGCAGCTCCA AGCCCGAGCC CCAGTGTGAG CTTTGAGCCA ACGAGAGCGG GAGCGGGAAA 
GGGCCCCCCT GCTCCGACAA TTCAACCGAC ATTGTCCAAC GCTCCAAGTA GTATGCCAAG 
TCTGAGTGCC TTACGCGGAT CCTCGCCACC CTCACAACAA CCTTCACAAA CCGTAAGCGT 
TTCACCGAGT GTTAGCGTAG AACCAACGAT AGCACCAGGG CCTCCCTTGT TCTATCTCAA 
GACTGGAACT AACCAAGACC TTGCATACAT CTCCGGTGAT AATCTTGGTG TCTATTCCAA 
ACCTGGGGCC CAGATCTTAG GAGCTGGAAG GTACGGAGAA GCGACATTCC GGAGTCACCG 
ATGGGGAAAT ACGTTCGTTA TTACAATCCC TGGATTCAGT GTCGGTGACA TGTACACGAT 
ATCACTCGGC TTTGCTGAGA TCTACTTTTG CGCCGAAGGC AAACGTGTTA TGACCATTAC 
TGTAAACGAC GAGGTATTCG AGGCCGACCT GGATGTGGTT GCTGCTGCTG GAGCGTGTAA 
TACGGCTCTC GTGATGAGGA AAGATTTTGC AGCCAATAGT GATGGTGCTT TTGCAATTGC 
TTTTTTCAGC CCTATCAACA ACGCAATGGT TTCTTTTGTT GAGATCGATT TGGCGGGGAC 
GTTGTCGCCA ACCTTTTCCC CAGCTCCTAG CTTTGCTCCG ACTTTCAGTT CAGCACCAAC 
AGAGTCGTCG GAGGTGCCTT CATTGGCGCC TTCAACGTCC GTATCTCCGA GCACTTCACC 
AACTTCAAGT GCGGAACCCA CAGTAGCTCC GGAGCCAAAT CCGTGGGAAG GTGAATACGC 
TATGACTCTG GTTGCTGTAG CTGCTGCAAA TCTGGACGAT GGGAGAATTC TAGCTTGGTC 
AGCGTGGAGC AGGACTCATT ATGCCCGTAG TGTCGGAAAA ACTTTCATTT CCATTTTCGA 
TCCTGCAACC AATGAGAGTA CGGAGGGAGA AATCACAAAT ACGAACCACG ACATGTTTTG 
CCCTGGGACT GCTACTTTAG GCGACGGTCG AATTATGATT ACCGGAGGTT CCAATGCAGC 
GTCCGTTACT TTTTTCGACC CCTCCGCCAA TAGCTGGTAC AGAGGTCCCC CAATGAAAAT 
TCCGCGGGGA TACCATTCGA TGACTGTGCT AGGGGATGGA TCGGTCTTCA CTCTCGGAGG 
TTCATGGAGT GGTGCAGGAA GGGGCAACAG GGGCGGCGAG GTTTGGAGTC CAACCGGTGG 
GTGGGTTTTG AAGAGTAACA TTCTCATACC TGGAAGCTCA AGCTTGCTTA CGAACGACGT 
TGGTGGCGTC TTTCGGTCAG ACAACCACAT GTGGCTCTTC ACTGCCCCCA ACGGTAAGGT 
ATTTCATGCC GGACCGTCGA AAAGAATGCA CTGGATCGAC GTTGCTGGCG AAGGAGAAAT 
ATCCGACTCT CTTCTCCGTG GCAACGACAA CGACGCTATG AATGGCAATG CGGTCATGTT 
TGATATTGGC AAAATTTTTA CCGTCGGAGG CGCTCCCAAT TATGAGTATG GTGATAACGA 
GGGAACTAAG CTGGCCCACG TTATCGATAT CAATGCCGGA GAAGGGTCTG AGACTGTTCA 
GAGGGTAGGT GACATGGCCT TCGCAAGAAC ATTGGCTAAC AGCGTGGGCC TCCCCTCGGG 
AGAAGTGATT GTTATTGGTG GTCAAACGAA AGTATTTCTT TTCACAGACA GAGAAGCTGT 
TTTCGCTGCC GAGATCTGGA GTCCTAACAC AGGCCAGTTC ACGACTTTGG CGGAAATGAA 
GATACCGCGC ACCTATCACA GTGTAGCAAT CTTGATGAAA GATGGTCGCG TGTGGGCGGC 
AGGTGGCGGA CTTTGCGGAA ATTGTCCTAC AAATCATAAA GACGCTGAGA TCCTTACCCC 
ACCCTACTTG CTCAATGAGG ATGGTTCCCT GAAGACGCGG CCTGTCATAC AGTCTTCACC 
GTCTCGGTTA GTTCCCGGTG AGACAATTAA TGTATCGGTG GACACAAGCG GCAACCATAA 
TTTTGTGCTC ATGCGGATCT CCGCTGTTAC TCACTCTGTG AACAACGACC AGCGGCGCAT 
ACCGCTCACG ACTGTGGGTG GCGACAATAA TTCCTTTCAA TTGATTGCTC CGGACAACTA 
CAATGTGACT GTACCTGGAA CTTACTTTTT ATTTGCTATG AATGCTGATG GTGTTCCAAG 
CGTTGGAAAG ACGATTGTAG TTGACGCCCC AGACGGTCCG CAGCCAGACC CGCCCCTAAT 
TTTTCCTATC GAGTCTGCGG ACTTTAGTGG TCTGTGCGTA AATATTGCAA GCAACAGCTT 
CGAGAACGGG GCCCAAGCTA CTCAATATAC ATGTAATGAG AACGCTAACC AGCAATTTGA 
TTTCCAATCT GCTGAAGGAG GGCTTTACCG TATTGTCGCC TTCCATTCCC AAAAATGCTT 
AACGGTCACT CAGGGATCGA TGGGTGAAGG AGCAAACATC GTACAACAAC CTTGTGACGA 
CTTTTCCCAT CAGCTATGGA CCGTTACGGG ATCTGGGAGT GATCAGCAAC TCAAGGCTTC 
ACATTCCGGC AAGTGTTTGA GCATTTTTGA ATCCTCCATC GCGATTGGCG CGATATTGGT 
TCAATTGGAA TGCAATGAGG AACCCGCTCA ACTCTGGCGA ATTGATGACC GATTGAACTC 
ATCACAAGTA GAGGCCCCGT CCCTCTCCAA CCCACCGAGC TTAGCACCAA GTGTGAGTTC 
CGCACCAGCT GTAGCGTCGG CAAGTCTACC ACCGACAATA GCCCCAGCGC CGCCAATCTT 
CTCCCTTCGA ACGGGATCCC CGCTAGACCT CCCTTACATA TCGGCGGGCG GACCGGCAAG 
CAAGACTTAC CAGGATCCAA CTCCGTCAGC TATTTCCGGA GCCGGAGAAT ACGGGGATGC 
AACATTCCAA CGCCATCGAT GGGGGAACAC CTTTACTTTT ACCATCCCTG GCTTCGTGGC 
TGGCAACACA TACGCTGTC 

 

Protein sequence

MPFLIGVAIS SRRAEYLVSL IVYGAMPQLC LKGKPSLEAR ASFILDRCHR QPKTAFKTQT 
TPQRQIVSEL SLCVEVAGAS QDDGASIFQG NCNDGNKHQV FDFIPASGTD NAYHQIRASH 
SNKCLGVADG ALAPGADIVQ LSCVDNDPAT LWKQRDGVLI LQHSGYCLSV DASSRSTSGA 
FMVQWFCDSP SVKWQVKTVS EQYDGLQQLL KRSNFARRSE SGFYLSTGTT HDNQFLTTNS 
SWSETETDGA TYSGCGSYGQ DTFNRHRTGP AFVFTIPGFV AGDTYDVTMG FAEMWVPQCQ 
DGKRIMNITV NGRTFAQDLD VYNAAGGCRT ALILTKSFEA SSRGEFVIDF TSTIHNPMVS 
FIQIQHVGAN AMQARMLADV PTASPNLSIE PTIARATNVS TIVSEGFSGL CVDILGGSVS 
DGAQAVQASC NGGDSQEYQF LIVGEGQFQV VASHSQKCLG VADLDVTDSA DVIQLPCTSN 
TLWYVVGGGA YLQLRVLHSA KCLSIFGASI APGTKLVQEA CDEGPDQLWR VADGLFAEET 
LEPSASAAPS PSPSVSFEPT RAGAGKGPPA PTIQPTLSNA PSSMPSLSAL RGSSPPSQQP 
SQTVSVSPSV SVEPTIAPGP PLFYLKTGTN QDLAYISAPS FAPTFSSAPT ESSEVPSLAP 
STSVSPSTSP TSSAEPTVAP EPNPWEGEYA MTLVAVAAAN LDDGRILAWS AWSRTHYARS 
VGKTFISIFD PATNESTEGE ITNTNHDMFC PGTATLGDGR IMITGGSNAA SVTFFDPSAN 
SWYRGPPMKI PRGYHSMTVL GDGSVFTLGG SWSGAGRGNR GGEVWSPTGG WVLKSNILIP 
GSSSLLTNDV GGVFRSDNHM WLFTAPNGKV FHAGPSKRMH WIDVAGEGEI SDSLLRGNDN 
DAMNGNAVMF DIGKIFTVGG APNYEYGDNE GTKLAHVIDI NAGEGSETVQ RVGDMAFART 
LANSVGLPSG EVIVIGGQTK VFLFTDREAV FAAEIWSPNT GQFTTLAEMK IPRTYHSVAI 
LMKDGRVWAA GGGLCGNCPT NHKDAEILTP PYLLNEDGSL KTRPVIQSSP SRLVPGETIN 
VSVDTSGNHN FVLMRISAVT HSVNNDQRRI PLTTVGGDNN SFQLIAPDNY NVTVPGTYFL 
FAMNADGVPS VGKTIVVDAP DGPQPDPPLI FPIESADFSG LDRWVKEQTS YNNLVTTFPI 
SYGPLRDLGV ISNSRLHIPA SV