| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49661 |
|---|
| Symbol | Tpt6 |
|---|
| ID | 7198149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011691 |
|---|
| Strand | - |
|---|
| Start bp | 337750 |
|---|
| End bp | 339256 |
|---|
| Gene Length | 1507 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184445 |
|---|
| Protein GI | 219128490 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00291408 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTAAAGTCCT CTCTCCCACG TCACGTTACG AAGATTCGGT AGTGTCGACA GAATTCTTCG
TCGGTTGTCT TTGAGATTAA TCATAGCACA CATCGCGAGA GACTGAGGCG AACAAATAGA
CCCTGGGGCT ATTGATCGAT TGTGCGCTGG CATTCGATCG ATTGGTACTT GAAATTTGGC
AGTGACTCGC AGTCATCAGC ATCATGGCGC AGACCAAAGC CAGTCAGAGC TCGACCTTGT
GGTTGCTGGT GTGGATGGTA CGTACGGACG GACGTGTGTG AGAATTGCGC ATTGTGCGGA
CGCCTCGACT GGCGGTGTTG CTTGGATGCC ATGCGGCGCC GGTCGGTCTC GAACCTTCTC
GTCCTCACGA CGCACTCACT TTTGTTCGGC TTCCATCGTG CTCGACTACC GGCAGGTCAA
CAACATTGGC GTTACTCTAC TGAACAAGGC AGCCTTTGCT AAAGTCGACT TTCGCTATCC
CTACTTCTTG TCCGCCATTC ATATGGCCTG CAACGCCGCC GGATCCCAGT TGGTCTTTTG
GAGTCTGGAT CGGGATGCCC GTCAAGCCCG CAAAACCATG GAAGAGCCGT CGGTGTCCAT
CTTTTCCCGC TTACTGGGCA ACGTCACGCG TCAAGCGCTC GACGCACAGG GACAAAAACT
CATCCTCGCA TTTTCCGTCA TTTTCTCCCT CAACATATCC ATCGGAAACG TCTCGCTCCA
GTACGTGTCC GTCAATTTCA ATCAAGTCAT GCGATCCTTG GTACCAGCCC TCACCATTGC
CATGGGATTG TGCATGGGCA AAGTCATTTC GCAGCGTCGA CAGTTGGCCG TAGTCCCGGT
CATTGTCGGG GTCGCCATGG CATGTTTCGG GGATATGAGT TACACCGCCC TCGGATTCTT
TTACACCGTA TGCTGTATTC TCCTAGCCGC ACTGAAGGTC GTCGTCAGTG GTGAAATGCT
GACGGGATCG CTCAAACTCC ATCCCGTGGA TTTGCTTTCC CATATGGCAC CTTTGGCGCT
CATCCAATGC GTTATCATTG CATTTTTTAC CGGAGAGATA CAATCCATTG CCTCGCGTTG
GGACACGGAA TTGAGTCCCT CGGTCAACGT CCGTCCCATG TTTGTCGTAT GGTTGAGCGG
AATATTCTCC TTTTCGCTCA ATATTTGTTC CCTCCAAGCC AACAAGCTCA CGTCGCCGCT
GACTCTCTGC ATTGCCGCCA ACGTCAAACA AGTATTGATG ATTGTCATTA GTACGATTTT
GTTCAACACC AATATTGCTC CGCTCAATGG AGCAGGTATC GTTGTGGTAC TCGCGGGATC
GGCCCTTTAT TCCTACGTTT CGGTCCAAGA AAAACTGGTT GCCACCAAGT CGCAAATGGA
GGTACGGGAA AGTGCCGCCG TCGGCCTCGA ATACGACGAC GACAATGGCA GTGGTGACGG
CAGCGAAACG ATTCAATTAC TGGAAAGCGG TAGCAATAAG TCAACTGGAC GCAAGGTGGT
GGCCTAG
|
|---|
| Protein sequence | MAQTKASQSS TLWLLVWMVN NIGVTLLNKA AFAKVDFRYP YFLSAIHMAC NAAGSQLVFW
SLDRDARQAR KTMEEPSVSI FSRLLGNVTR QALDAQGQKL ILAFSVIFSL NISIGNVSLQ
YVSVNFNQVM RSLVPALTIA MGLCMGKVIS QRRQLAVVPV IVGVAMACFG DMSYTALGFF
YTVCCILLAA LKVVVSGEML TGSLKLHPVD LLSHMAPLAL IQCVIIAFFT GEIQSIASRW
DTELSPSVNV RPMFVVWLSG IFSFSLNICS LQANKLTSPL TLCIAANVKQ VLMIVISTIL
FNTNIAPLNG AGIVVVLAGS ALYSYVSVQE KLVATKSQME VRESAAVGLE YDDDNGSGDG
SETIQLLESG SNKSTGRKVV A
|
|---|
| |