| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49495 |
|---|
| Symbol | |
|---|
| ID | 7195723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011690 |
|---|
| Strand | - |
|---|
| Start bp | 412917 |
|---|
| End bp | 414131 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184247 |
|---|
| Protein GI | 219128074 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.754844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGACCATTCA CAGTCACTTA CCTTAGCCTT TTCCCCTTTG CTACGTGGAA AGGCTGAGCA
TTAGGTTTTG TGATCCTGGA AAGAACCGCA AGGTAGAAAG GCAACGGTTT GACGCCAAGA
AGGAAGGGCG GACAAAGTGG ATCCACGTTT TTGGATACGC TCAAAATAGG CGTTCATGCT
ACTGTTATCG CTACTACAGC AGTTGAGAGA GACACTGGAC GCTTGGACGG GAGTCCCTGG
AAGTCTGGGG GTAAGTCGTT CTTGGGAAAA TTGCTGCATC ATGAACGATA GTGTACCCTA
CCAACGTTTC TGACATTGGT TGAGATCTTC TTGCCTCTAG TATCTCCTGA TTATTGGATT
GGTCGTTGCC GGATATTCCT ACACCAGTGC CTCTCTCATC GCTGATACTA AAGATATGCC
AGAAGAAGAG GAGCAACCCG ATCCGCCACG CAACTTTACT GCAAAGCAGC TACGGTATTT
CAATGGAGAA AAAGAAGACA AGGGCGATGA TCTGAAACCG GTATATCTTT CGGTGAACGG
AACCGTGTTT GATGTGTCCG ATGGCCGGAA CTTTTACGGC CCCGACGGTA CGTTGGAATG
GCGTACTCAA ATTCTGATAG TTTCTGTACC ATCACTTAAT CTTACCTCGC TATTCCTGGA
ATGAGAGCAG GCCCCTACGC TGCGTTTGCG GGACGCGAAT GCGGCGTGGC TCTCGCCAAA
ATGTCCTTTG ACGAGGAACA CCTCGACGAT TTCGATGGTT GTACCAAACT GAATCCCGGT
GAAAAGATGG AGTTGGAAGG ATGGATTGAT AAGTTTACGT ACTATCGACC GTATCCGATC
AAAGGTCGAC TGATTCCCGA CCAATGTATG CCATCCCCAG AACGAGTACT CTCGAAAGAG
GAGTTAGCCA AAAACAATGG TAAAGGTCCA ACACCGGAAG GTTATGCGAC GCCTCCGATA
TACATTGGTG CCGGTGACAA AGTTTTTGAT ATGTCGTTTG GGGGTGTCAC CTTTTACGGT
GAGGGTGGTC CTTACCATAG GTTCGCCGGT TACGACGTTT CCCGTTCCTT GGCCAAGATG
AGTTTAGATG AGGAAGACAT CAAGAACTCG GATGTTAGTG ATATGAGTGA GAAGCAACTA
AAAATCATGA ACGATTGGAT CAAAACTTTT GAGGAGCGTA AAAGCTACCC ACTTGTGGGC
AAGCTAGCAA AGTAG
|
|---|
| Protein sequence | MLLLSLLQQL RETLDAWTGV PGSLGYLLII GLVVAGYSYT SASLIADTKD MPEEEEQPDP
PRNFTAKQLR YFNGEKEDKG DDLKPVYLSV NGTVFDVSDG RNFYGPDGPY AAFAGRECGV
ALAKMSFDEE HLDDFDGCTK LNPGEKMELE GWIDKFTYYR PYPIKGRLIP DQCMPSPERV
LSKEELAKNN GKGPTPEGYA TPPIYIGAGD KVFDMSFGGV TFYGEGGPYH RFAGYDVSRS
LAKMSLDEED IKNSDVSDMS EKQLKIMNDW IKTFEERKSY PLVGKLAK
|
|---|
| |