Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49450 |
Symbol | |
ID | 7195809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | - |
Start bp | 277731 |
End bp | 278759 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184219 |
Protein GI | 219128015 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATCCC CATTGGCTGG ACAACGCTTG AAAGGATACC TTCCTGTTCG TCTTACGCTA CCCCAGGTAG TGGAGGATAT TGAGGATGAA ACGTTTTTGT TCGTGAAAGA ACATCAGTCT GGATCATCGG GTGGCACAAC CGACAAAGGA ACGACTCTGT TCGTTGCTAA TGTGCCGGTC GTACCGTCCG TGCAAACCAA ATTACTACTG CAGTCTATTT TCGGTCGATA CGGAGAAGTA GCTCGTGTGA CGGTTGTAGA GAATCCGCGC AAAGATCAAC AACAGACTGG CGAAGAAAGG GCGGAGCAAC TACTCGGCTC ATGGACAACC AAATTCAGCC TACCTTCCTT TCTGGCACCG ATTCATAACA CCGGACGTTT CGCACACGTT GTTTTTACAA CAACAAAAGA ATTGAAACGA ACCATGCAAT CTTTGGCTGA GGTAATGGAA AATATAGAGG AAGATAATCA AGAGAGCTTA CCCGGACTGA CGCTTGACAA AATTGAGTTA CAAACGCTTG CCGATGAGTC CGAACGCCGT CAACGTGAAG AGCAAGGTCT TGCCAGCGAC AGCGAGATGG AAGAAAGGCG GAACGACAGC ATCCCAGGAA TTCTGAAAGT TGCCGAACGC TATCGGCGAA GCTGTCGAGC CATTTCACGG AATGCTTTGT TGGAGGAATG TAACCGCGTG ATGCAAGAAT ACGAGGACAC GGAAGAAGAG AATACTAGGG CCCGTCAAGC AGCATTGAAC GAACCCGATG AAGACGGATT CATCACAATT TTGCCATCGT CTCAAGCGGG GAACAAGAGT GAACTGGAAA GCGATCCGAG TGTTCAAAGG CGTCGAAAGG GACAGCAGCG AAGTCGAAAA AAGAAAGATG GTGCTGGCAA GAGTGAACTC TCCGACTTTT ATCGATTCCA GACAAAGGAC ATTCGCAAGA GGACATTGCA AGACTTGCGC CAGCGCTTTG AGGAAGATCT GGCGAGGGTC AAGAGAATGA AAGAGGAGAA TCAGTATCGA CCTTTTTGA
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Protein sequence | MGSPLAGQRL KGYLPVRLTL PQVVEDIEDE TFLFVKEHQS GSSGGTTDKG TTLFVANVPV VPSVQTKLLL QSIFGRYGEV ARVTVVENPR KDQQQTGEER AEQLLGSWTT KFSLPSFLAP IHNTGRFAHV VFTTTKELKR TMQSLAEVME NIEEDNQESL PGLTLDKIEL QTLADESERR QREEQGLASD SEMEERRNDS IPGILKVAER YRRSCRAISR NALLEECNRV MQEYEDTEEE NTRARQAALN EPDEDGFITI LPSSQAGNKS ELESDPSVQR RRKGQQRSRK KKDGAGKSEL SDFYRFQTKD IRKRTLQDLR QRFEEDLARV KRMKEENQYR PF
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