Gene PHATRDRAFT_49373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49373 
SymboldsCYC6 
ID7195885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp63928 
End bp65016 
Gene Length1089 bp 
Protein Length362 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184058 
Protein GI219127679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.483156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCTA TCCCCGTTAC ACCAGCGAAA GGCACTGCCA TTCAGGGCCA AACAAGTTTC 
AATCGAAAGG TGAGACACAT GGATAAGGCC CCGGTGATGG AGCATTTGCG AGTTTTGCGT
CGCTTGGAAT CGGAAACATA TCCACCGTGT GAGGATTACT TGACGTTGTT TGGCCCTTCA
CATACCGAAG GCGTGACCGG CTACATTAGC GAGCGTTGGA GAGGAAGCAT TTGCGAGTGG
TGTTATGAAG TCGTCGATCA CTTTCAGTTT GATCGCGAAG TTGTCTCCAT CGCGCTCAAT
TACCTGGATC GCGCGGTAGC GGCGAAAGCC AGGGATACTC TGAAAGCCAT CCCGTATCTT
GAGTTCCAGC TTATTGCTGT TACTTCTGTC TACATGGCCA TCAAATTGCA TGGCGCGCAT
GAGACACATG ATGGCCCTCG TCGCAGGCTA CGCATCGATG CCTTTGTCGA GCTCAGCCGT
GGACACTTTG AAGCGGGTGC GATCGAATGT ATGGAACGTT CCATACTCTC GACTCTCAAC
TGGAGGGTGA ACCCACCAAC CCTTCTCCGC TTTATTTCCA ACCTTCTTGA ACTCCTTCCT
GAATGGTCTC CGCTTCCACA TACCGTTTCC TACGGGGACG CATTGGGCGG AATCTACGAT
TACGCCAGAT ATCTTTCGGA GCTTTCTGTT TGTGTTTCTA AATTTTCATT TACCCTATCC
TCTTCGGAGA TTGCATTTTC CGCTATCCTG TGTGCCATTG AGGCACTACA GGCAACTCGA
ACAGTGCCGG ACTTCGCTCG TTCCGATTTT TTAAAGAACG TCGCTGAAGC CACAGGTCTG
CATGCCGACG AGCCGCAAAT CCTGTCCGCT TGCGAGATGC TCCGGGAGCT TTACCCGAGC
ATTTTCGGAA GAGACGATGA ACATCACCTC TTTGCCAGTC ACGCATGCAC AGTTGGTCAG
CCTCAGTCTG TGAGCGGAAA AAAATCTCCA GTTTGTGTGT TGGAGGAGCA AGCGGAAAGC
CCAAATACAC GCCGCAAACG AAGTCGCAGT AGCGACGATG ATAAACAACC TCTGTATTCC
AGCTTTTAA
 
Protein sequence
MEAIPVTPAK GTAIQGQTSF NRKVRHMDKA PVMEHLRVLR RLESETYPPC EDYLTLFGPS 
HTEGVTGYIS ERWRGSICEW CYEVVDHFQF DREVVSIALN YLDRAVAAKA RDTLKAIPYL
EFQLIAVTSV YMAIKLHGAH ETHDGPRRRL RIDAFVELSR GHFEAGAIEC MERSILSTLN
WRVNPPTLLR FISNLLELLP EWSPLPHTVS YGDALGGIYD YARYLSELSV CVSKFSFTLS
SSEIAFSAIL CAIEALQATR TVPDFARSDF LKNVAEATGL HADEPQILSA CEMLRELYPS
IFGRDDEHHL FASHACTVGQ PQSVSGKKSP VCVLEEQAES PNTRRKRSRS SDDDKQPLYS
SF