Gene PHATRDRAFT_49093 details

Gene Information

• Locus tag: PHATRDRAFT_49093
• ID: 7195323
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 561498
• End bp: 566522
• Gene Length: 5025 bp
• Protein Length: 1260 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002183770
• Protein GI: 219127077

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0396405
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGATTCCAAA CTCACATATT CCTACGGAAC TTATCACGAA GCCCATACAA AGCTCGCAAC 
CTTGGATATT TCTTCCGCAA ATTGTAACTT ATCCAGTGGA CCTACACTTG ACACTGCGCG 
TTGTCGCTTA CAAAGTTTAC CCTGCTACTA GCTGTCGGTC AACTGGCTTC TTATCGTATT 
CTCCACTTCT TCCACAACAC CTCTGTCATG GTTCCTCTTC CGCAAGAAGA CGGTGAGCGA 
CGGCCTCTCA AGCAGGGGGA CTACGGCGCT ATTCGTGTCA CAAATGACCA CGACAATTCT 
CTCGAAATGG AAGAAGCGGA TGACGGCCAG GGGAAAGATC AAGCTTCTTC CGTGCCTCCT 
CCTTCCTCCA CATCCAGCGA CGCTGCTCAC CGCGTTCTCA TCAAAACTCA AGGATCGTTT 
TGGGAGGATG CCCGGGATTT TGCTCCGGGA AGTATTCCCC ACTCTGCTGT GCTTGCTTTG 
ACTATTGGTT GCGTCTGCGG CGTCGCCGCC TGGTTGTACT ATATGTTTCT GGAATGGGCG 
CTAGATTTCT TGTGGCACGA CTTGCCGGAA CGATTCGTCA TTGACTACTG GCCCGAATAC 
TTGTATGTGC TGTGGATTCC TCTCATCGGT TTCGGTATGG CTGTTGGATT GGGTATAGTG 
GTGAAGGTTA TGGGCGAACC GGGAGATCTA CCGTACACGG TCAAGTGTGT GCACGAGAAG 
GGCTACGTCG CAATGAACCA CGTAATGCCC ATGGTTATGG CGTCACAATG CAGTATTTTA 
GCGGGAGGAT CGCTCGGCCC GGAAGCGCCG CTCGTGGCGA TTTGTGCCGC ACTCGGTGGC 
TTCGTCAGTC GCAGCGTTTT CGGAATGACG GACCGGAATC TAGTGCGCAA ACACACTCTC 
ATGGTACGGA CGATTTGTCA GGACAGGTGG TCTTGTCACG GGTGGCTCCG GTGGTTTGAA 
ACAACATTCT CACTGCGACT TTCGTTTGTT TCGTAGGGTA TGGCGGGAGC CTTGGCCGCA 
TTCTTTGGCT GTCCGCTTGG AGGAAGCTTG TTTGCCATGG AGGTAAACAG CCGATTCGGG 
ATCGAGTACT TTGAACATAC TCTCGAAGCA ATTTTATGCG GTGAAATCTG CCTAGTCGTA 
TTTCGCGCCT TGGCCGGTCT GCCTATTCAA GCAATCTGGG ATATTTCGGA CGACAAATTG 
GAAGCCACTT CCGTAGTGGA TATCCTATAC GGATGCGTGC TGGGGCTCTT GGGGGCTGGA 
GTAGCCTGGG GGTTTGCCAA CTTTCACTGG AAGGTCATGC ATATGTTTCA GCACTTCAAT 
CTACTGAAGA ACGAACGCGC AATTCACCGT GCCATGGCGG GTGCTGTCGT GGTAGTGCTG 
ATGGGGATGC TCGTTCCGCA GACCATGTTC TGGGGCGAAT TTGAATTCGA AACCATTGCC 
ACAATGGCTC CAACCAAAGA TCTGATGCAC ATATGGCCCA CATCAGGATT GTTGGGGTTC 
GAAATGGATT CTTTCGGATC AGCAATGATT GTTGGCGTCG CAAAGCTGAT TGCAATTTCT 
TTTACGGTAT CGGGTGGATA CCGTGGAGGG TATATTTTCC CAGCGTTTGC TGCGGCAGCC 
GCCTTGGGAC GCGCCATTTC TATTCTTTGC CCCTTTATTC CCGTCCAGCT CTGCGTTTTG 
TGCATGGCTG CTGCACTGAA TGTAGCCTTG ACTCGAACCG CATTGGCCAC GACACTCATT 
CTAGCGTATT TGTCTGGCGA GCAAAACTCG ATCTCTGCCA TTCTAGCCGC GTCACTGGTG 
TCTCTCTTTG CGACCGGCTA CATGCCTTTC ATTCGGTCGC AAATGGTGCG AGCCGATTTG 
GACGCGAGCT TGTACTATTC GGAAGATTAT CCCGAAGAAG CCTTTTCTAT GACACCCATG 
GCCGATGTCC ATAAGATGTC CAATACTACT ACCACTCCGG GAGCAGTACA AGGACGCAAA 
AGCAACGGTG GTGTGCAAGT AGTGTAGTCG GACAATCGTT TTCCGGAAAC TGGATAATGG 
TCCTAGCTGA CGATGCACGC ATGATTTTCC GGCAGCATGT TAGTTCTCTT TACGTACCGA 
ACTTTGACTG CTCTCTCTGT CAGTCCGGCA CGTGGGCGAG TTTTGATTGT TCACATCAGG 
CGTCTGACTG ACTGTGAACA AATTTTGCAA TAGTTTTGGT TACACATTCT AATATATTTT 
GATTTTTTAT TCGGCATTTT GTGTATTTCT TATTATCGTG ATACTACTTT GGGTTTTTCT 
CCCTTTTTTC TCTTTTTCCC GTCAGATTCT CCACTTGGTT CACACACAGT CAGAAGAGAG 
ACCAAACGGA GAGGAATGTG AATTCGAATC AAGCAACGAA CGTCCGACTA CTGGCAGTGA 
GCTATCGGCC TAGCAAACTT TATCTACTTT CTACATTACC TATTTATGCC AAGATCCTAC 
CAGAATGATA CCGAATGGCC TTTGCATTAC GCCTGTCGAG TAGGCAATCT AGAACAGGTC 
CAATACTTGG TAAAACAATC AAAAGCGAGT ATCGGAAGCA AGGACGATAT AGTGAACCAG 
CACGACGACA ACGATGCAAC TCCTTTGTAT TACGCTGCAC TGACGGGAAA TACTGACATT 
TGTCGTTTTC TGCTAGAAAA GGCCGGCGCA AGATGTCAAG GTCACGATGG TGCTCGAGTG 
TTTTACGTGG CCTTGACTTC AGACCTACGG AAATTACTAC GCGTTTGGAG TTTATCAGCG 
GCAACGCGCG ATCCATATCT AGATCGTTGG CAAGATGCCT TTGTGCAGGC ATCCGAATCA 
GATCAACAAG GGGATTGTGT GTACCATCGC CGTAGCAGCT TCCAGCATAA CTCAAAACCT 
TTCTGTCGGT CGAAATCGAT TTATTTCCAT CGAATTGTTG TCCAAGCTCG GTGCCCCGCA 
TTGGCTGACT TCTTACACGA GCACTACCCG GAGTCTGCGG AGGATAGTAA AGCTGCAAGC 
GAACTACGTT TGGATGAATA TCCTGAGGCC GTCGTTTGCG GATTTCTGGA ATATCTGTAC 
ACTGGGGTTT GGTATATTGA GAATCTTTTG GAGCTCCGAT CACAAGCACT TGCTCTCGCA 
TCCAAGTTGG AACAACAAGA TTTAGTGCAA ATTATTCATA CAAAGTGGCC GGACATGGCA 
AAACGCATTG AAGAGGATGG CAAAGGTTTT CAAACTTCTT TGACTATGGA AGTTTCGAGC 
ATTCCACGGC TGCGGAAGGA CTTGCGGAAA TTGGCACACT GGGTGTCAAC ACCCCATCAC 
GAAATTTCTT CCTTTCATCG ATTGAACCAT CTGTTAACCT GGAGTGATGC GACCATCCAA 
TGCCGGGATT GTTCCTGGTC AGTGCACCGC TTTGTCACGC AATCAGTATC CGAATTTTTG 
GACCGCGCCT GGTCGGGGTC CTTTCTAGAA GCACAGGAAG GCTCTTTGAA TGTAAGCGAA 
ATGCCCTGCA CACCCGAAGC CTGGTCGCTT GCAATTCAAT GGATGTACGC GGATCAATTC 
CTGACGTCTG TCGATTCGGA CACTGCTCTG GATGTCCTGG AATTGGCGAC GACTATCTTG 
TGTCCACAAC TGGCCTCGTA CGTGGCGAAC ATTGTGCTGG TTTCCCTAGT CGAATTGGAA 
AACGTTCTGG ATCTTTTGCT TCTCGCTCGA TCGTACGGGT TTGACAAATT GGAAGATTGC 
TGCATTGGGG TTGTGGCGTT GCACATAGAT AAGCTGGTGG GCTCAGACGA CCTCCGCTCC 
ATCTTGACTG AGGAGGCTGC CGAAATTAGT CAAGGTGGCG ATGTGCGGGT GCCGGATGTT 
CCCGTTGCTG CTGAAATACG TCGCGCTATC AAGGAAGCCG ATTTTGACGA CGAGGATCGA 
AATGCCCGGC TCGAAGTCGT TCAATTCCTT GTGGATGAAG CCTTGCAGCA TCTTACACAA 
TAGTGTATAT ACATCAATTG CAAGATATTT GGCCGGAAAC AATTTTGGGA ACAAGTTGTA 
TCTGTTGACA GTGAACCAAC CCTTTTGGGT CACTTCTTTC GCGTTCAACT CCTGAATAGC 
AAATGCTATG CCAATGAAGC CACAGATTTT ATTTTTTGGA GCTTGTCAGC CGTTCGCACC 
TCCATGGCAA AATAATAATG GAGAAATTGC TTTGGGTAGC GTTGGCAATC CCAGTCGTGC 
GTGATCGAGC GGTTTTACTG TAAAGTTCAC ATCGTCACGA TTGCTCCTAC TCGTTGGATC 
GCCTTCCTTG AAGCGTCTCT ACTATTGGGA AAGCGAAGTT GATCGAGTGA GCTCATTGAG 
TTGTTCCTCG CCACAAACCG AAGTACTCGA AATCTCCAGC AACTCTCCTT TACAGACAAA 
TTGACTGAAG ACATGAACTT CTCGATTGTC CTCACAGGGA GAGCTACTGC AATTCTAGTA 
CTAGCCTGGG CGCAAACGTC GGTGACGGCC TCCAGCTGTG ACGATTCTGT CCATTGTTCC 
GCTGGATATT ACCTTGAAAG CGCTTCTTTA CGCAGCGCTT CTGCTCCATG TATTGCGATC 
GGAAAAGGGT TCTGGAGCCC GTCGTTTGAT AACAATCGCC ATTCGTGCCA AATCCTACCG 
CTCTACGTGG CAGCTAGCGT TGCCTTGCCT TTTGCCGGTA CAACCGACGA TGTAACTGGA 
TCGGAGCGTT ATCGTTTGCG TGAGGAAACC GAAAGGTTGT CTGCTTTCCG GGACGCGTGC 
GAGCGGCCTG GCGGGAGTTC ACTAACTTTC ATGGAAACTC CACCTGCTAT GACGTCGAGA 
AGATCCACTT CTCATAACAG CGTCTACATA CCGCTAGAGC CTTTTCTTTC CATTTTCATA 
GTGGTCATGC TAGCCATCTT TTTTACGGCC ATTCTCGATA GAAGAGCGAA CGACAACGAG 
CTAGAACTTG AAACGCTTCG AGCTCAGACG GCACAAGAGA TTGCAGCCTT ACGAAAGATG 
CTTTTGGATT TCCAGTTGAA GGCAGACCGT AATTGTATAG ACTAA 

 

Protein sequence

MVPLPQEDGE RRPLKQGDYG AIRVTNDHDN SLEMEEADDG QGKDQASSVP PPSSTSSDAA 
HRVLIKTQGS FWEDARDFAP GSIPHSAVLA LTIGCVCGVA AWLYYMFLEW ALDFLWHDLP 
ERFVIDYWPE YLYVLWIPLI GFGMAVGLGI VVKVMGEPGD LPYTVKCVHE KGYVAMNHVM 
PMVMASQCSI LAGGSLGPEA PLVAICAALG GFVSRSVFGM TDRNLVRKHT LMGMAGALAA 
FFGCPLGGSL FAMEVNSRFG IEYFEHTLEA ILCGEICLVV FRALAGLPIQ AIWDISDDKL 
EATSVVDILY GCVLGLLGAG VAWGFANFHW KVMHMFQHFN LLKNERAIHR AMAGAVVVVL 
MGMLVPQTMF WGEFEFETIA TMAPTKDLMH IWPTSGLLGF EMDSFGSAMI VGVAKLIAIS 
FTVSGGYRGG YIFPAFAAAA ALGRAISILC PFIPVQLCVL CMAAALNVAL TRTALATTLI 
LAYLSGEQNS ISAILAASLV SLFATGYMPF IRSQMVRADL DASLYYSEDY PEEAFSMTPM 
ADVHKMSNTT TTPGAVQGRK SNGGVQVVSY QNDTEWPLHY ACRVGNLEQV QYLVKQSKAS 
IGSKDDIVNQ HDDNDATPLY YAALTGNTDI CRFLLEKAGA RCQGHDGARV FYVALTSDLR 
KLLRVWSLSA ATRDPYLDRW QDAFVQASES DQQGDCVYHR RSSFQHNSKP FCRSKSIYFH 
RIVVQARCPA LADFLHEHYP ESAEDSKAAS ELRLDEYPEA VVCGFLEYLY TGVWYIENLL 
ELRSQALALA SKLEQQDLVQ IIHTKWPDMA KRIEEDGKGF QTSLTMEVSS IPRLRKDLRK 
LAHWVSTPHH EISSFHRLNH LLTWSDATIQ CRDCSWSVHR FVTQSVSEFL DRAWSGSFLE 
AQEGSLNVSE MPCTPEAWSL AIQWMYADQF LTSVDSDTAL DVLELATTIL CPQLASYVAN 
IVLVSLVELE NVLDLLLLAR SYGFDKLEDC CIGVVALHID KLVGSDDLRS ILTEEAAEIS 
QGGDVRPQIL FFGACQPFAP PWQNNNGEIA LGSVGNPSRR ATAILVLAWA QTSVTASSCD 
DSVHCSAGYY LESASLRSAS APCIAIGKGF WSPSFDNNRH SCQILPLYVA ASVALPFAGT 
TDDVTGSERY RLREETERLS AFRDACERPG GSSLTFMETP PAMTSRRSTS HNSVYIPLEP 
FLSIFIVVML AIFFTAILDR RANDNELELE TLRAQTAQEI AALRKMLLDF QLKADRNCID