Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49064 |
Symbol | |
ID | 7195309 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | - |
Start bp | 462412 |
End bp | 467034 |
Gene Length | 4623 bp |
Protein Length | 779 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183756 |
Protein GI | 219127048 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACGGGGAGTC AAATACTCAA AACAATCACA GAACTTGAGA GTGTGTGCGT GTGTGTGCCA TACAAATCCC ATAAAATCCG CAACGGGCAG GATTTCGGTA CACACAAACA CAAATCCACA TCCATCGACA ACCACACACC ATGAACTTGT TTCGTACGAT TGCCCTCCTT GGGTTGGCAT CTCCCACAGT GTTGGCCTTT GACTACCAGA TCACCGGCAG CGAGAGCATC GTCCTCACGG ACGTCGAAAC CGGCATTGAC AAGATTGCCA CCATCTTTAC CGACGAACAG ATTCTCGTGT CGGTCGATGG ACTCACCTGG GAACCGTCCA CCACCAACGT CACCGAATCC AATAACCTCC TCGTTTGGGA AACCTTTCTG GACGGACAGT TGCAGCCCCA GGCCAGCGGT ACTCAGTCCT TGGCCGATAC CGGACGCATC CTCCCCACCC GAATCGACGC CGGAGAAATC GTCGTGGGCA GTGGGGGTCG GGTCAATATT CGTGTCGAAA TTACCGTCGA CGGTAACACC ATCACGACCG AAAAAGAGTT TGAAGCGTAC GGGTCCGGAG TGTCCATTAT TCCTCTGCTC GTGGTCCTCG TGTTTGCGCT TTCGACCCGT ATGGTACGTA CGATCCTGTG TGGGATTTCC GTTTGGCCAA CAAGCCATTT GAGTCTCGCT CTACGAACCG TTCTCCTTCC TCACCGTCAT TTTGGCTTTG TACGCGGTTT CTAGGTGGAA TTTTCCCTCT TTTCGGGCAT CTTTATCGGA GCCTGCATGA TTAGCGGCAA TCTCAAGGAC GGGTTCAAGT CCACGTTGGA AGACTACATC CTCGAGGCTC TGGCCGATGT GGATCACGGA TACGTTTACC TTTTCACGCT CTTTCTCTCG TAAGTTTGAA GTCACTGGAA CAAGATTTTC ATTCATTGCT CTCGCACTCG CACCAGTGAA CAAGAAATAA ATACGCGACC AATGCTGTGT GTTCTCACCC CACAAACTTT GTTGTCTAGT GGCTTGGTCG GAATGTTGGA AAAGAGCGGA GGCATGTACG GTTTCACCAA GGATGTTTCG CGATTCGCGA CCACTCCCCG GACGGGTCAA CTCGCCTGTT TCTCGGTCGG CATTTTTGTG TTCTTTGACG ACTACGCCAA CGTCCTACTC GCCGGAGAAA CCATGCGTCC TCTTCTCGAC CTACTCTACG TTTCGCGCGA AAAGCTCTCC TTCATCGTCG ACGCCACGTC CGCTCCCATT GCCAGTCTTT CGCCAGTCTC CAGTTGGGTC GGATTCGAAG TGGGACTCAT CCAAACGCAG CTCGATATCA TCGTGGAACG AGCCGGAACC GACGATATTG GTATCAAGAC CTCCGGTTTG GGAGTGTTCT TGCAAAGCAT CAAGTACCGC TACTACCCGA TTTTTATGAT TGTTCTGATG TTGGGATTGA TCTACAGTGG CCGTGATTTT GGTCCGATGC TCGTTGCGGA ACGCAAAACT CAAGTCTACG AACGCTCCGA TGGCGGTGAC GGCAAGGGAG TCGCCAGCAA AAACGGAACC TCGGAGAAGC ACAACGCCCC CAAGGAAGGA ACGCCTTTGA AATCCTGGAA TATGGTGTTC CCCGTACTGG TTTTGGTAAG TCGCTTCAAA GGCAAACGGA GCGTCGTCAG TTTGTACCAC GCGCATTGTA TCACTCACGA ACTCGTCGAC AGATTTTTTT CATTTTTTAC ATGCTCGTCA AAACGGGTGA GGAACCGGGG ACCAGCCAAA GCTTCATGGA CAAGATTGAA AACTCCAACT CGTATTCGGC CCTGCTTTGG GGTACCATGG CAGCCGTGAT GCTGACCACC ATCTTCTACT TGCTACAGCC AGTCAAGGAT GGAAAAGTTC TCGTTCCCGT TCCAAGTGTG GTGAAGGAGC TATTCTTTTC GCGCAAAGAA AAAGACGAAG ACGCCGAATC GCCGCCTCGT TTCCTCATGA CGGTTCACGA TAGTGTCGAG AGCTTCCTCT ACGGAATGGG CCGCATCTTT CCGGCCCTCA TCGTTCTGAC ACTTGCTTGG GCGTCTGGTG CTATTATGAT TGGCGTCGGC GCCGACCGCT TGTTCTCACG CTGGATTGTC GGCGGTATTG ACCCTAAAGC CTTGCCCACA CTTTCCTTTA TCATTTCCAT GTTCATGGCG CTGGCTACCG GAACGTCTTG GGGAACCATG TCTATTCTGT TTCCTTTGAT TCTGGTGCCA ACGTACGACG CCTCCAACGG TGATCCCACC ATTTTTTACG CCGTGACTGC CGGAGTTCTG AGCGGCAGCG TGGCCGGTGA CCACATGAGT CCAATTTCGG ATACCACAGT ACTAAGCGCC CTCGCCTGCG ATTGCGACCT CATCGCACAC GTGACTACTC AGGTACCCTA TGCCATGCTA GTGGTCCTCA CGAGTATCAT TTTGGGGACC GTGCCGATTG GCTACGATGC CTGGCCTAAT ATCATCGGAA TTCTCCTTGG AGCTATTCTG TTGATTGGAT TTGTGTACGG ACTCTGCGCA CCAGTAGTCA ACGCTACCGG GCGTTTTGAT CCCGTCACCG AGCTTTTCAT CAAGTTTTCC AGCCGCGGTG AAAAGGAATC CTCGCTTTTG CTCCTCAAGG AAGATACGAT CAAGAAAGCT GCTGGCGAAA ACGTCCAAGA GTCGAAGGAT CTCGATGTCA GCGAAGACGA TAGCTCCAAG AAATTGGAAG AAGCCGTCTA CGAGACGCCG ATTGGCGTCG AAGCAGGGGA TTCTCGCGAG GAGAATGAGA ATATGTAGTA GTGGAAAGGT TTTCTCTTGA AATTGCCGAT AAATGTTTTA CATGGGCGAG ACAGACCTTG AGCGTTTCTA CTTAAATTAT TTTTTATTGA TACGGGTTTG CTCAATGCCT CTCTCTGCAT TATAGCAAGA GTTAAGTTAG TTTCGGGCCT TTTTCATTTG ATCGCGAATA TCGGTGGAGC TGATATCTAC CCGGAAATCC TTGAGGAGCG TAAATTTCGC TCGTAACCTC TCCGGCAGCT GTCTCACGTC ATCTTCGCCA CTCACAAAAT CAGGGTCCCC CAACTTTTGT TGCACCCTTC CACCCACTAC GAAATGGCAA GCCATATCAT CTAAAGCGGC GATCATTTGC TCCTCACAAT CGTTGTAGTA TTTCGGATTT AATAAACGCA CCAAGGTATC AGTCCCTATC ACCATGTGCA GAGGAATTTT CTGATCGAAA GATCGTACCA CCTGCTGAGG TTGAAAGATA TCAACCTTTT GCTTGAAGAG TGGTGCATTT GTCAAAAGAA TACCCCAACG CTCCGGCATA TCAGCCAGCG TCAAAAAATG CTGAATTCGA CGGACAATCT CGTCACTCGC AAGACTCGGT TTGTCGGCAT TTGTTATGGA CAACTCAAAC CAAGCCACTT GACAACTAGA CTCTGTTAGC GCTGCTTGAA CCAGCTTTAC ATGACCCTCA TGCGGGGGAT TGAAGCTTCC TGGAAAAACC AAAGATTTGG GCGGTAAGAA CGCCTGCGTC AAACACTTGA AGCCTTCCGC GGTGGGGATT AATGAAACTG CTTCCTCTTC TCCGCATAAA ATTTTATCTG CTGCCTGGCG CACGACCTCG TCTGGATTAT ATCGTGCGGG AATAGGGAGT GTTATGCATA ACTGGTCACC ACAGCCTGTC GTCAGCTCCA GTAAGGTCGA AGGCGCTGAC GCACTTTCAA GTGCGTGCTC CAAGCACGTA AGTATACAGT GACTGACGAA GACATCTTCC TCAAATCTAC TGCGCTTCGT TGAATCGCTG TCTCCTCCAA CCAAATCAAT TTTCATGGCT ACTTGTCTAG CGTCCGAGAA AGAAACGGCA ACAAAGGCAC GGCTGTTCCT TTTCGAAGTA TCAGATCGCA AAGCCGAGGC GCAGCCAACA CCAATAGCGT GGGTCATATT TTGCAGCGGA AAGTGCCCGT ATTGAGGATC ACCCGCCGCC GAAAGCTTAA GCGCTTGTTT AAGGGCCGCT AGAGAAGAGA AAGAAGCCGA TTCCGCCGAG CAATATCGAA ATGTTTCCGA GTCGAGGTTT CGCTGCACAT ACTGTCGATA ACTTTCGCGA TCGTACGTCA GTGTTCCTTC CAGAAGAATA CTGGATGCTC CAGGAGTAGC TGCAAGGGTG GAAAGAAAGC TGCCCCCACC GCCGGCAACT GCCAAGGCGA GCCGGCAACT GGCACTGTGT CTTTTCCGAA AGTTGTTCAT GCGCTGTTGG AGGCTTTCAA GGGAAAAATT CTCGTCTTCA GCCGTACTGC TACTGACACT ACTATAGAGA GAGACCACTC TCGGCAACAT GCTAGCTCTG GTTTCTGGTG TCGTCATCAC AGTAGACGAC GGTCGACTTC CTTGTCGAGA GAAGAAACTT TTCGGCAACT TCCACAACAT GCGAGAGCTG AATGAAAGAC TTGACGTCGA GACGACCAAC GAGCAGAAGA GGAGACTAAC AGAATGCGAG GCGAAGAAGC GGATGAAAGA AGTACAAAAG GGCCTTCCCA GCATCTTCAC ACCTCTGGCG CTTTGACTTC GTTTTACGTG CACCCCTACA TAAGTTTTCG AATATGGTTG ACTGTAATGT AAAACGATCA AAG
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Protein sequence | MNLFRTIALL GLASPTVLAF DYQITGSESI VLTDVETGID KIATIFTDEQ ILVSVDGLTW EPSTTNVTES NNLLVWETFL DGQLQPQASG TQSLADTGRI LPTRIDAGEI VVGSGGRVNI RVEITVDGNT ITTEKEFEAY GSGVSIIPLL VVLVFALSTR MVEFSLFSGI FIGACMISGN LKDGFKSTLE DYILEALADV DHGYVYLFTL FLSGLVGMLE KSGGMYGFTK DVSRFATTPR TGQLACFSVG IFVFFDDYAN VLLAGETMRP LLDLLYVSRE KLSFIVDATS APIASLSPVS SWVGFEVGLI QTQLDIIVER AGTDDIGIKT SGLGVFLQSI KYRYYPIFMI VLMLGLIYSG RDFGPMLVAE RKTQVYERSD GGDGKGVASK NGTSEKHNAP KEGTPLKSWN MVFPVLVLIF FIFYMLVKTG EEPGTSQSFM DKIENSNSYS ALLWGTMAAV MLTTIFYLLQ PVKDGKVLVP VPSVVKELFF SRKEKDEDAE SPPRFLMTVH DSVESFLYGM GRIFPALIVL TLAWASGAIM IGVGADRLFS RWIVGGIDPK ALPTLSFIIS MFMALATGTS WGTMSILFPL ILVPTYDASN GDPTIFYAVT AGVLSGSVAG DHMSPISDTT VLSALACDCD LIAHVTTQVP YAMLVVLTSI ILGTVPIGYD AWPNIIGILL GAILLIGFVY GLCAPVVNAT GRFDPVTELF IKFSSRGEKE SSLLLLKEDT IKKAAGENVQ ESKDLDVSED DSSKKLEEAV YETPIGVEAG DSREENENM
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