Gene PHATRDRAFT_49054 details

Gene Information

• Locus tag: PHATRDRAFT_49054
• ID: 7195424
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 440854
• End bp: 443415
• Gene Length: 2562 bp
• Protein Length: 853 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002183749
• Protein GI: 219127034

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGCC CATATGATGG CCAGACTCCA GCAGAGCAGG CAACTTTCGC TCGTGAAGAG 
CTTATGCATC TGGATGAGGA ATCTATGATG GACGACTACA ACGACGACGA GACGGAGAAT 
AACCAAAGTT TTCTCAATTT GCTCCCGGAA GACGACGAAG CCGGAAACGA CGACCCGGCA 
CAGCTCTTTG CCATTCTTGA AGATGCCATC AATCAAACCG CCAAACAAAC AGGCGATACA 
GGGCGAGCTT TAACGGCGGT AGAACAACAG CAAAAGCGCG AAAACGCGGA ACACACGTGG 
GACCGCGTGC GGCGCTGGAT GTGGGCGCAT CCGCAAGTGG AACAACGCCA AGCCGCCGCG 
TTTATTCGCG GGCAGGCCGA CGCCACAGCG TTGCATCTCA TGTGCAAACT GCATAATCCT 
CCCGACGATA TTATCCAAGC CATCGTCGAC TCCGCCGTCG ATGTTGTGTC CTGGACGGAC 
GCGCACGGTT GGTTGCCTTT GCACCATGCC TGCGCTAACG GAGTGTCTCC GGAAACCATG 
AAAGTCCTCG TGGATGCCTA TCCCGCCGGT AAGCTGCAAC AGGACAATAT GAGGCGAACA 
CCGCTCCACT TTTATGCCAC GCGGAATTCC GATAGTACGG TTATCATGAC AACTAACACC 
GAACTCCTGG CTGACGATGG CGCGGCCGAA CTCACCGATC GTGGCGGCAT GTTACCCATG 
CATTACGCGT GTGCGTACGG GACCGACCCG GCCGTACTCG AAGTCTTGGC TCAGGTCTAC 
CCCGCCTCTC TCACGGCCAA AGAAAACAAG GGTCGAACGC CGATGCATTT GGCCATGGTA 
AATGCTCACC GCGACGCCAG TCCGAACGTG ATTCATTTCT TATTGGAGTA CGCTGAATCC 
CGAGCGACCG TCAACGTACG CGATCAAGAC GGTTACCTAC CCTTGCATTT GTTGGCTCTC 
GGTCTCAAAG GATACACGGC GGATGAATCC ACCAAACGCA GTAACGTGAG CGCTTGCTTG 
AGTATGTACA TGGACGCGGA GCCTCAAGCC GCAGCCGACT TTTTGACGGC GATTCAGGAT 
TTGCCGGATT GGCTTCAAGA TACTGCAGTC GTATCGAAAC ACGTGCGGAA CGTTTTGAAC 
TACAAAATTG TTCAGCCCTT TCCCACGTCT ATTCTCATGT TGGACGGATA CTTTCTGATT 
GTCCTGATTG TATGTTTTGC GTTCTCGACG AAATATTATA TTGATTTCCT CTTCGAGCCG 
GAGAGCAACA AAACAGACAT TGACATTTAC ATTGTGTTCC TTTTCATTGG AGCGTCGTAC 
TTTTTGATGC GCGAGCTGGT ACAAGTGGCT TCGTTGGTTA GTCTCGGCAG TTTCAGTAGT 
TGGTGGTCAG ACGCCGCCAA TTGGTTGGAT GTTGGTGTAA TTACAATGGT TTACTACTAC 
GCCATCTGTA TGAGCATGGA CAGCCCAGTG GATAGAAATC TTTTTCGAAG TGGCGCCGCC 
TTTGGACAAG GAATTCTGTA CGTGGCAGTC ATCGTTTATC TCAAAAGCAC ATACGTCGAC 
TTTGCCGTAT TCGTGGGTGG CGTACTGTAC GTCGTACAAC GGCTAACGGC ATTTCTGACT 
GCCGTGGGTG TTATCTTGTT GGCCTTTGCC CAAATGTTCT ACTTTATATA TGTGGATGGC 
GAAATGTGCA CCAACAGGCT GCAGCCCGAT GATCTAAACT ACGACGCAGA CCTTGACTGT 
CGCTTTTCTC ATTGCTCCTT TGAAGAATCC CTTCTGCGAG TGTACAGCAT GATGATGGGA 
GAGATCGGAG ATGAAAAACG CTATTCCGCG GGCCCGACGA GTCTAGTGGC ACAGATATTG 
TACGTCGGCT ACGCCTTTTT GGTTGTCATT CTGCTGTCGA ATGTTCTTAT TGCCATTGTC 
ACCGATAGCT ACGAAATTAT TCAGAACGAC CGCGCTGCGA TTGTATTTTG GACGAATCGG 
TTGGATTTCG TGGCCGAGAT GGATGCCATC ACGTACGGAG CACAGCGTCG CCTTGGTTGT 
TTTCGAAAAA AGAAGGCGCC CATGCAGGTA GAGGAAATTC CCAATGCCCC GGGATTAGTC 
TCGGATGACT ACAATGACAG GAATGGCTCT TCCGACTTCT TTCGATACGG TTGGCAACAA 
GTCATGCTCT TGTTTGACGC AAACCTGTAC GAAGAGATCG ATCCTATCGA GTCGCTGGTG 
TACAATATTT TTCGAATCGC TTGTATTGTT TTCGTTATAC CGTTGTGGTT GATCATGGGC 
GCGGCAACTG CTGGGTGGTT ATGGCCTCCA CAAGTACGAG AGGCTCTATT TTGTCAGAAA 
GGCACGACCA CCTCTCGTTC GGAGATTGAG CGCAAAAAAC TCGAGCAGCT GCGAACTATT 
CAAACCGATC TGACATCATT GAAGAGTGAT ATAGTGCGAG AAATGACTAG CGATCGCGAC 
GAAATGATAC GAATGAAGCT GGAAGTGGAA GGAGTCCAGG CAGAAGTCTT ATCCGATCTA 
ATACAAGTTC GAGAGCTTAT CACGTCGCTT CTTGGAACTT AA 

 

Protein sequence

MSRPYDGQTP AEQATFAREE LMHLDEESMM DDYNDDETEN NQSFLNLLPE DDEAGNDDPA 
QLFAILEDAI NQTAKQTGDT GRALTAVEQQ QKRENAEHTW DRVRRWMWAH PQVEQRQAAA 
FIRGQADATA LHLMCKLHNP PDDIIQAIVD SAVDVVSWTD AHGWLPLHHA CANGVSPETM 
KVLVDAYPAG KLQQDNMRRT PLHFYATRNS DSTVIMTTNT ELLADDGAAE LTDRGGMLPM 
HYACAYGTDP AVLEVLAQVY PASLTAKENK GRTPMHLAMV NAHRDASPNV IHFLLEYAES 
RATVNVRDQD GYLPLHLLAL GLKGYTADES TKRSNVSACL SMYMDAEPQA AADFLTAIQD 
LPDWLQDTAV VSKHVRNVLN YKIVQPFPTS ILMLDGYFLI VLIVCFAFST KYYIDFLFEP 
ESNKTDIDIY IVFLFIGASY FLMRELVQVA SLVSLGSFSS WWSDAANWLD VGVITMVYYY 
AICMSMDSPV DRNLFRSGAA FGQGILYVAV IVYLKSTYVD FAVFVGGVLY VVQRLTAFLT 
AVGVILLAFA QMFYFIYVDG EMCTNRLQPD DLNYDADLDC RFSHCSFEES LLRVYSMMMG 
EIGDEKRYSA GPTSLVAQIL YVGYAFLVVI LLSNVLIAIV TDSYEIIQND RAAIVFWTNR 
LDFVAEMDAI TYGAQRRLGC FRKKKAPMQV EEIPNAPGLV SDDYNDRNGS SDFFRYGWQQ 
VMLLFDANLY EEIDPIESLV YNIFRIACIV FVIPLWLIMG AATAGWLWPP QVREALFCQK 
GTTTSRSEIE RKKLEQLRTI QTDLTSLKSD IVREMTSDRD EMIRMKLEVE GVQAEVLSDL 
IQVRELITSL LGT