Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48756 |
Symbol | |
ID | 7195010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 164433 |
End bp | 165584 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | |
GC content | 62% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183303 |
Protein GI | 219126101 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0290752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCATT CCGGTACCTT TCCTTTTGGA AATTGCGTCG TGTGGGTATT CCTTACGCTG GTGTCCGTAC TCCGGCTGGG ATCCGGATGC CACGCCGCCT GGACGAGTCC CGCCCGTCGA CGGCGTGGGC GTACCACGAC GGGTCCGGAC GTGAAGGATC GGACCGTGCG TGCCGTCACC GTCGCCAACA CTCCGTACCT GTTCGGTACG ACCCCGCGTT ACTGTATCGA CAATTCAGAC AGTCCTCCTT TAGAGGTTCC TGGGGCTCCA CACGACGACG TGGACGTTCC CGTTCTCTTC CAAGACGACC AAATCCTGGT CGTGCACAAG CCTTCCGGTG TGGCCCACCA CAACGACGCG GACACGGGTC GTCTCGGTAT TCTCAATCTC ATTCGACACC AACAGACTAC CGGTCGGTTT GCTTACCCCC ATCGTCTGTA CGGAGTCCAC CGATTGGACC GCGTCACCTC GGGCATCCTC GTCCTGGCCA AAACGCCCGG GGCGGCCCAA ATCCTCACCC AGGCCTGGCG CGAAGACCGC GTCACCAAAT ACTACGTCGG CCTTTCGGGG AATAAGGCCA CCACGTCTAA ACAGGGACAC GTGCGGGGAC GGATGATTCG CGGACGACGA CGGTCCTGGT TGTTGACACG GGAGACGCAC GGATCCAACG TTGCGCACAC CCGATTCTTT ACCGCCGGAC TCGGGCATTT GGCGCCGCCG TCGTCAACAC TGACGAACGT TTCGCCGAAA ACGCTCCTTC TCTTCCGACC CACTACGGGT CGGACGCACC AACTGCGCGT CGCCGCCAAG AGTGTCGGTC TCCCCCTATG GGGGGACCCC GTCTACCGGG ACGGCCGTCA CCGGACCGAA AACGCAAGCA CGCCGTCCCG GACCTTGCTC CACGCCGCCG GATGGCATGT GCCAGCCGAT GATACGCATC CCGAATGGAC CCTTTGGTGT CCACCGCCCC CCGAGTTTGA CGTTTGGGCC AACCCCGACG CACGGGACAC AGAGAACCCG GCATGCTTCG ACTCCGTCCT ACACCGCCTC CTCCACAAAC ACGTCGACTG TGAACCCCTC CTTTACGCCA TTGATGCGGC GGCTAGCTTG GGTACGACGC GCGTCGGACT ACTGCACCCC GACCAAGTCT AG
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Protein sequence | MIHSGTFPFG NCVVWVFLTL VSVLRLGSGC HAAWTSPARR RRGRTTTGPD VKDRTVRAVT VANTPYLFGT TPRYCIDNSD SPPLEVPGAP HDDVDVPVLF QDDQILVVHK PSGVAHHNDA DTGRLGILNL IRHQQTTGRF AYPHRLYGVH RLDRVTSGIL VLAKTPGAAQ ILTQAWREDR VTKYYVGLSG NKATTSKQGH VRGRMIRGRR RSWLLTRETH GSNVAHTRFF TAGLGHLAPP SSTLTNVSPK TLLLFRPTTG RTHQLRVAAK SVGLPLWGDP VYRDGRHRTE NASTPSRTLL HAAGWHVPAD DTHPEWTLWC PPPPEFDVWA NPDARDTENP ACFDSVLHRL LHKHVDCEPL LYAIDAAASL GTTRVGLLHP DQV
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