Gene PHATRDRAFT_48756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48756 
Symbol 
ID7195010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp164433 
End bp165584 
Gene Length1152 bp 
Protein Length383 aa 
Translation table 
GC content62% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183303 
Protein GI219126101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0290752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCATT CCGGTACCTT TCCTTTTGGA AATTGCGTCG TGTGGGTATT CCTTACGCTG 
GTGTCCGTAC TCCGGCTGGG ATCCGGATGC CACGCCGCCT GGACGAGTCC CGCCCGTCGA
CGGCGTGGGC GTACCACGAC GGGTCCGGAC GTGAAGGATC GGACCGTGCG TGCCGTCACC
GTCGCCAACA CTCCGTACCT GTTCGGTACG ACCCCGCGTT ACTGTATCGA CAATTCAGAC
AGTCCTCCTT TAGAGGTTCC TGGGGCTCCA CACGACGACG TGGACGTTCC CGTTCTCTTC
CAAGACGACC AAATCCTGGT CGTGCACAAG CCTTCCGGTG TGGCCCACCA CAACGACGCG
GACACGGGTC GTCTCGGTAT TCTCAATCTC ATTCGACACC AACAGACTAC CGGTCGGTTT
GCTTACCCCC ATCGTCTGTA CGGAGTCCAC CGATTGGACC GCGTCACCTC GGGCATCCTC
GTCCTGGCCA AAACGCCCGG GGCGGCCCAA ATCCTCACCC AGGCCTGGCG CGAAGACCGC
GTCACCAAAT ACTACGTCGG CCTTTCGGGG AATAAGGCCA CCACGTCTAA ACAGGGACAC
GTGCGGGGAC GGATGATTCG CGGACGACGA CGGTCCTGGT TGTTGACACG GGAGACGCAC
GGATCCAACG TTGCGCACAC CCGATTCTTT ACCGCCGGAC TCGGGCATTT GGCGCCGCCG
TCGTCAACAC TGACGAACGT TTCGCCGAAA ACGCTCCTTC TCTTCCGACC CACTACGGGT
CGGACGCACC AACTGCGCGT CGCCGCCAAG AGTGTCGGTC TCCCCCTATG GGGGGACCCC
GTCTACCGGG ACGGCCGTCA CCGGACCGAA AACGCAAGCA CGCCGTCCCG GACCTTGCTC
CACGCCGCCG GATGGCATGT GCCAGCCGAT GATACGCATC CCGAATGGAC CCTTTGGTGT
CCACCGCCCC CCGAGTTTGA CGTTTGGGCC AACCCCGACG CACGGGACAC AGAGAACCCG
GCATGCTTCG ACTCCGTCCT ACACCGCCTC CTCCACAAAC ACGTCGACTG TGAACCCCTC
CTTTACGCCA TTGATGCGGC GGCTAGCTTG GGTACGACGC GCGTCGGACT ACTGCACCCC
GACCAAGTCT AG
 
Protein sequence
MIHSGTFPFG NCVVWVFLTL VSVLRLGSGC HAAWTSPARR RRGRTTTGPD VKDRTVRAVT 
VANTPYLFGT TPRYCIDNSD SPPLEVPGAP HDDVDVPVLF QDDQILVVHK PSGVAHHNDA
DTGRLGILNL IRHQQTTGRF AYPHRLYGVH RLDRVTSGIL VLAKTPGAAQ ILTQAWREDR
VTKYYVGLSG NKATTSKQGH VRGRMIRGRR RSWLLTRETH GSNVAHTRFF TAGLGHLAPP
SSTLTNVSPK TLLLFRPTTG RTHQLRVAAK SVGLPLWGDP VYRDGRHRTE NASTPSRTLL
HAAGWHVPAD DTHPEWTLWC PPPPEFDVWA NPDARDTENP ACFDSVLHRL LHKHVDCEPL
LYAIDAAASL GTTRVGLLHP DQV