| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48484 |
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| Symbol | |
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| ID | 7203766 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011685 |
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| Strand | - |
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| Start bp | 630552 |
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| End bp | 632381 |
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| Gene Length | 1830 bp |
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| Protein Length | 380 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182998 |
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| Protein GI | 219125457 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00786628 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGACTGCGAC CAGACTCTTC GCAATCAACC AGATCTATTA GATAGATCTG ATGCCTCCTT
CAGGACTTGC AAATCCAAAA CACCCAATGG ATAGGCGCGC TCAAGATTTT GCGAAAGGAA
CCTTCATCAG AACCATCCAT CATTCTCGTG CACGTAACGA TCCTTACCTT TGATACTTTG
ATGATCTCAG TCACGATGCT ATTCGCCCTC CTAGCTTTCT TGCTGCTTCC TTCTCCCGAA
AGGGGCCAGT ATAAATTTTG TTGTACGATC AAATTATTCG TGTAGTGCAC CTGTCACACC
CACAAAGTCT TCGCTTTTGG CTAGATTTAG AATGATGCTA CTATGCCTTT CGTTGAATGA
TCCCAGTCAC GACGTGTGCA CCCTCTCTTC CCCCTCATCA AACTGTATTC GCATTTGTCT
TTAAAAACGG CACAAAGCTG ATCTTGCCAC AATCACATAA AAGTGTTCAA AGGGAACTTA
AACATGAAGA TTCTTCGCCA AGTTGTTCTA ATTTCTCTGG TGCTGCCTTC AATTTCGGCC
ACTTTAGGCC CGCATCCCAA GCTCATACGC GCTGAGGGAG ACAAGACGAT TACAGGACAG
TACATCATTG AACTGGATCC GACAATCCCA GACTCAAGGA GCTTTGCCAC GAAAGTCCTC
AAACGTGCTT TCCAAAACAA TCTCATTGAA ACCTATGACT ACGCCTTCAA AGGCTTTTCC
GTCAAGGACA TCCCTGATAC GTTGCTGAAC TTGATGCTAA ACATGAAAGA CGTTCTTTCG
ATATCGGAGG ACACTGTCGT GGAGGCGAAT GCTATACAGA GAAATCCCAC CTGGGGTCTC
GACATCACCG ACGGACAAGA CGACAATCGC TACAACTACA CGTACACGGG GCGGGGCGTT
GATGTCTACA TTCTTGACAC AGGAATTTAT GCAAATCATC CTGAACTCGA AGGTCGCGTG
AAGAGTTGTG TTTCCTATAC TGGAGAAGGT AAGTACATGA GCTTGCATCT TGTTTCGAAT
TGATGTCTTC GAAGAAGTTG TTGGAATGCT TGATGCCTTT AAATGTCATG TGGAGCTGAG
TAGGCTTTAA AATTGACGCA ATGCGCTCAC CGACGTCCAA TTATGTTCCG CGCAGCTTGT
GGGTCTGATC TGTACGGGCA CGGTACCCAC GTAGCCGGAA TTGTCGGCTC GAAAACCTAT
GGCGTGGCCA AAAAAGTCTC CCTGCACGAT GTCAAGGTGC TCGATCAATA TGGCGGTGGG
ACCTGGAGTG GTGTTATTGC CGGCGTTGAT TATGTGGCCA AGATCAAGAA AAGAAACCCC
AGACGCAAAA TTATTATCAA CATGAGTCTT GGCGGATTCC GCAACAGACC TATGAACAAG
GCAGTAAGGG CCGCCGCGAG GGCCAAGGTG GTCGTGGTAG TCTCTGCAGG AAACTACGAC
GACAATGCCT GCAACTACTC TCCTTCGTCA GCATCCGGTG CTTTGGTAGT TGGTTCATTT
GACGAATTTA ACTACCGTTC CTGGTTCTCG AACTGGGGAA GCTGTGTGGA TATATTTGCA
CCAGGTAGTG ACGTCCTTTC GCTGGATTCA AACGGTGGAA CAGTTACTTA TTCGGGGACG
TCCATGGCAT CACCGCACGT GGCCGGTGTC GCCGCGTTGT ACTTGCAAGC GGGTCGAAAA
ATCAGAAGCG TTGTCACCGA TGCCATGAGG AAGCAATTGT TCGATGTTAA AGGTTCTACA
AACCGACGCT TGAGCACTTA TCGATTGCAT TAGCCTCAAG CCGCGTGTTC AAGTCTTTCC
CCTGAGGTCA ATGCAGCAAT ACATGTGTAG
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| Protein sequence | MKILRQVVLI SLVLPSISAT LGPHPKLIRA EGDKTITGQY IIELDPTIPD SRSFATKVLK
RAFQNNLIET YDYAFKGFSV KDIPDTLLNL MLNMKDVLSI SEDTVVEANA IQRNPTWGLD
ITDGQDDNRY NYTYTGRGVD VYILDTGIYA NHPELEGRVK SCVSYTGEAC GSDLYGHGTH
VAGIVGSKTY GVAKKVSLHD VKVLDQYGGG TWSGVIAGVD YVAKIKKRNP RRKIIINMSL
GGFRNRPMNK AVRAAARAKV VVVVSAGNYD DNACNYSPSS ASGALVVGSF DEFNYRSWFS
NWGSCVDIFA PGSDVLSLDS NGGTVTYSGT SMASPHVAGV AALYLQAGRK IRSVVTDAMR
KQLFDVKGST NRRLSTYRLH
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