Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48350 |
Symbol | |
ID | 7203809 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 197400 |
End bp | 204412 |
Gene Length | 7013 bp |
Protein Length | 1773 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182790 |
Protein GI | 219125025 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0719027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGCG ACCGAGCCTA CAGCAACGGC AATCGCTTAC CTTTACCCGA CGACGAGTCC ACGGAAGGAT CACATGAGTC GTCACAGCTA GTGGTGGCCA CGAAAGAAGA TGAAGAACGC AACGAGGTTA AGCAAGTACA GTTGCTGGCT CGCAGAGAAA CAAATCATGT ACGGCTGTGG CGCCTAGTTG TCCTCGTTAT GATTCTAACT ACAGGAGCAG TGGTTTCAGC ACTGACTTTC ATTTTTTTAA ACCGGGAAGA TGAGGAGGGC GCCGAGAACA ACGCAAGTTA ATCATCTGTG AGAGATCATG TGATTCCGCG TCCACATTTT TTAGTCTCAC GTGTTTTCTC CCATTTTTGT TGCAGTACTT CTCCTTCGCT CATACCATCG AAGATGCGTC CCAGTTTCAC ATCACGAATA TGAATCTAGC GTTTAAGAAT TTAGGAGAGA TTATTACAAC CGCGGCGCAA GCCACCAACG CGTCATTCCC TTTCGTCACC GTTCCAAAAT TCGAAGTTTA CGGCCGCCAT GCGCGCCTTC AGTCAGGAAT TGAAACATTT ACTTTCAATC CGTTCATTAC TGACGAGACA AGGGCGGCCT GGCAGGCCTA CTCAATCCAA AACCAGGGAT GGTTGAAGGA AAGTCGAGAT ATTTTTCTTG GCGGCGACGA AGGGAACCAC CAGGACTACA TCGATGGGCC CATCACACCG ATTATTTGGC AGAGACAAGC AGACGGAAGC CCGATTCCTA CGCCCGGACC GGATACATAT GCTCCTGTTT GGCAGGTAAG CGTAGGGGAG TGCCACTGGC CACTTAGTAT TTTGCAATCA AACAACCCCA CGCTAACTTA AAGAAACTAG AAGTCACTAA CACTTCTCGC ATGTGCTTTG CCGTTTGCAG ACATCACCTC CAATCTTTAA TCCAGCAACC GTAAATTACA ACATGTTTTC TGAGCCGTTC TCCAAGCGCA TGTACCAAGT CATTCTCAAT CTTAGAGAAG CAGTCCTTTC AGAGACCCTG GATCTTACTC GTCTTTCCGG AAGCGCAGTC GCTCCAGAAG ACCACGAAAT CATGCACGAT GCTTTTGTAT CAAGCATAGA CACTACCACA AATGTGACAG GGTATAAGCA TCCCCACAGC GTGCTGGTCC AGCCTATTTT TAGTGAACTC AACAATAGGA GTGCCACGAT CGTCGGATTG TTACAAGCCG TCATTCCGTG GGACCGATAT TTCACTGACT TGTTACCACA AGGAGTGAGC GGTATACACG CTGTTCTTCG CAACACGTGC AATGAATCTT ACACATACGA GGTGAAAGGC AACTCGGTAC GTTTGTCGTT TTTGTACACA AAATGTAAAA GCCTTTGTTT TGTACTGACA ACAGTCCTTG TCCGAAGTAG GCTATCTTCT TAGGTCCGGG AGATCTGCAT GAGCGACATT GGAATCATAT GGAACGTGTG GTAGATATGA CGAACTATCT GAACCCCGAG AGAACCTTGA ACGAACCTGG TCATTGCGTC TATCGTATGC ACGTGTACCC TACCGACCGC TTCTTTGCGA GCGTATCTAA CCTCCCCACG GTTTTCACTT CAGTGATCGC CGTGTCATTT GTTTTAATGG CAGTGACATT CTTCATGTAC GACCGCTTCG TTCGTCGCCG TAACGAGAAA GTCGTTGTGG CTGCAGCGCG CTCCAATGCC ATCGTATCTA GTCTGTTTCC GTCGAATGTA AGAGATCGTC TATTCGAAGA GCGTGACGAG GAGAAAAGAG CTTTTGCAAG AACACAACAT TCGGGCCGGT CGAAAAATGC GCTTCGAGGT TTTTTGGACG GCGAAGAAGC CGAGCTTGAC ACGGACGACG ACGGGGATAT GTACAAGACC AAACCAATTG CCGATCTATT TCCAAATACG ACGATTTTGT TTGCTGACAT CGCGGGCTTT ACGGCGTGGT CATCCGCCAG GGAGCCTACA CAAGTGTTCA TTCTTCTAGA GACATTGTAC CGCGCTTTCG ACGAGATTGC GAAGAAGCGC CGTGTATTCA AGGTTGAAAC GGTTGGCGAC TGCTACGTTG CCGTGACGGG TTTACCCGAT CCGAGAAAGG ACCACGCGGT GGCTATGTGT CGTTTCGCTC GAGATTGCAT GTACAAGATG CATTCGTTAA CCAGAAAGCT GGAAGTGACA CTTGGACCAG ACACAGCGGA CCTTTCCATG TAAGTGTTTG CTAATTCGAA ATGCAGCATG CAAATAATGA ATTGATCAGA GCCGTCGTGA TATGGAAACA AATGAGATAA CGATGCTTTC TCACTCGTGA TCTTTCTCTT TTATCCTCGA GTAGGCGCAT GGGTATACAC TCCGGCCCCG TAACTGCCGG TGTGCTTCGC GGAGAACGAT CTCGTTTTCA ACTATTCGGA GACACCATGA ATACCGCCTC GCGATTGGAG ACGACGGGGC GACGTGATCG CATTCATCTA TCAGAGGAGA CAGCGGAGCT ACTGACTATG GCGGGAAAGG CCAAGTGGAT CAAACCTCGT GAAGACAGAG TAGTTGCCAA AGGAAAAGGA GAGCTTTCAA CATTTTGGCT GGAATGTGGG GAAAAATCAA AACGAAGTTC ATCATCTGAA TCCGCCGACG AAACAGAATA TCCCGAAGAT ACTAGCGCAG CATCAGAAGT ATCTTCCGAT GTTGCTTTCA ACACAACCGG CGACGAAGAT TTTGCGTTGC GATCGATTTC GGCCAAGGTT TCTCGATTGA TTGACTGGAA TGTCGACGTT TTGTCCCGTC TATTGAAGCA AGTCTTGGCG AGGCGCATGG CCGAAGGTTC CATGGTAGTT GGCACATCAA TGCCGTTGAG AATACCATCC CGAGCCCCTG GAAAGACGAT CTTGGACGAA GTAGAGGACT ACATTATTCT CCCTCGGTTT GATCCCAAGG CAGCGAAACA TCAGATCGAC CCGGATTCCA TCGATCTGGA CCCAGACACA GAAGCACAGC TGTACGAATA CGTTTCTACG GTGGCTTCTC TATACCAAGA CAACCCGTTC CACAACTTTG AACATGCCTC GCACGTTACA ATGTCGGTCG TCAAGCTACT TTCACGTATC GTCGCACCGA TGGACCTGGA CTTTGACAAC AGCAAGGACG AGGCAGTAAA AACGAAAACG TTGCACGATC ATACGTACGG TATTACATCG GATCCGCTGA CGCAGTTTGC CTGCGTGTTC TCGGCTTTGA TTCACGATAT TGATCACAGC GGTGTTCCGA ACGTGCAACT GATCAAGGAG AATTCGCGAA TCGCCAAGTA CTACAAAGAG AAGAGCGTGG CCGAACAGAA CTCGGTCGAC TTGGCGTGGG AGCTGTTGAC GGAGGACAAC TACTCCAGAT TGGTGGCAAC AATCTGCCCG ACCGGGTCTG AGCTAAAACG TTTCCGCCAG CTGGTTGTCA ATTCGGTCAT GGCCACCGAC GTGATGGACA AGGATCTGAA GGAGATCCGC AACGGCCGCT GGGACCGTGC GTTTGCGGAA CCCCTGTCGT CGTTGTCCAA GAGTCCGAGA GAAAGCGTGA ATCGAAAGGC AACAATTGTG ATTGAGCATC TGATCCAGGC GTCGGATGTG GCTCACACCA TGCAGCACTG GCACATCTAT CGCAAATGGA ACGAGCGTCT GTTCCGTGAG ATGTATGTGG CGTACGAGTT GGGTCGCGCG GAAAAGAATC CGGCCGATTT TTGGTACGAG GGTGAGCTTG GCTTCTTGGA CTACTACATT ATTCCTCTAG CGAAGAAGCT GAAGGACTGC GGTGTATTTG GGGTATCCAG CGACGAGTAC TTGAACTACG CTGTGAAGAA TCGCAGCGAG TGGGAAACAC GGGGGCGGGA TATTGTGGTC GAAATGATCA CGGCCTTTCG GAAAAAGGAT GAAAAGCACA AGTCAATCAT GTGCCAGTAA ATCAGTTGTT TTGTTGTAGA TGATAACATA GAAGTATGTA GCGTGACGAT GGCTGTGCCT GTAAACCCAA GGTTTGGGCT GCTGACGTCG TTTGCCGTCC AGGCTATCGG CCGCAGCAAC GGCGTCGGCC ATTACCATTT CGTGAGCGAA TTAAAGCTTT CATGCCACTT GGCAGTGAGC GATCTTAGTA GCAAGCTAAC TAACAGTAAG TGTTGCAATT GATGAGTTGG TCCAGATTTG ATGGACGTCA TTGGACCGTT GGTCACACGT TATGTTGCTT TCCGTTAGTC GGATCGTTGC TCTTTTTGAA AAAGACTATA TAGAGACATC ATACGTTGGG AACGTCTTTT TATTCCCGTT GATTTCCATT CACGGCTACG AAAACCGATC GACGACGGTC CGATTCGGTA GGATTGTGCC GGAGCCAGTC AGTCATCGGT AATCCGTCCG ATGACCCCAC CCCCGACGGT GTGCGACGCG TTCCTATCTT TCGTTGGAAA CCCGGTTTCC CAACCAGTCA AACGAACATG TTCGCATGCA ATTTCACTGG TTCTGTTACG GCCCAGCCAG CCGTGCTGGC TGGCTGGCAC TCGGGACACC AAACCTCTTC GTACTAGTTC TAGCTACTGC TACAGAGCGA GGAACAAGCC AAATTTCCCG AACCACAGCA GTGCATACAA ACATATGTAC AAGCGCAGGT TGTTTCCCCC GTGTCACGCA ACACCACTGG CACAACAAAC AAAAAAGTAC ACACACACAC ACGCACCACA CACAAATACG CATAACCCCC CTCAACACTT ACGTATTTTT CGACAGTGCC CAGTGACCAT TCACTCGTCA CGGAACGATT CACTCTCCAG GAATCGACCG GTCTGGCACC GTATCTTTTT TGAGACGCTC TCCTAAATTC AGATTGCGAT CCTACGATTG TATCTCTTCC ACAGTGTCCC GAGGATGGAG ACAATGAACG GCGCCACGAG AGGACCCCCA TGTCCTAGCA AAATCCTGCT TCTCCCCAAA CCCTCGTCAA CGGTCGAGGC GAAATCGTTT ACCAACACTA AACAAAATCG GATCTCTTCC GCCAACTCGA GTCACAGCAG TGCCAGATTG CACTTGAACA ATCACAAGGT AGAGAAGCTA CATCAGGGCG CCTGCAAAGC AACGGGGGCG CATATTCGCG TCAAGCTACT GCCGGAACAC TTCCAACCAT CCGATAAGGA CGTTCTCTGT GGACGGGGTA GGGCGTGCAA AATGTGGAAG GGCAATCAGG ATTACCGCGA GCTAGTGGTT AGTAATCTAG AAGCCTACGC GTCGTCCACG AGCAAGCTCC ACAAGGGAAT GATACTCAGC AACATCGTAC AGCGCGTACG CATCAACAGT CCGGAAGGCG GTTTCGTCAA GAAGGATTCG GAAACGGGAC GCTGGTACGA AGTGGGGGAC TTTTTGGCAA GGGAGAAAAC GTCGCAGTAT TTTCGAGATG CCCTCCACGA GCAATACAGC AGCAGTGCCC AAGCCAAATA TAATCGCCGC AAAAAACGCC ACACGGATGG GAATTACCTG GAAACTCTCC CCCCGACGAG CAGTGTTTTC CCGCCCAGTG CAGCGAATCC AATCGACACC GCCATGCACG AGTCTTCCGA TGTTCCGTTG GTGGACACGA TCAAAACAGC AGTTTTGGAG AAACGTCAGG TACGTCGCAG ATCCGCTACT GAAGGAAACG CGTGAATTTC TGAATGACGA AACTAGAAAA TCAACCATCT TTCGACCGAT TGGAGCTTCA TCGGCTCCGT GAGAGACTTT CTTTCTCAAC ATGTTCCGAC AGAGAACCGC TTGTCCCCTT TCACGTAAAT GCAATATATC GTCTCTGAAC CGTTGTAATC TTTGTTTTTA CCCAGATTCC ACCCAAGAAA CGCAAAATTG AACGAAGACC TTCCGAAGAC GACGTGGCAT CTGTTCTCCA GAAAATGGCG TCCGTCAAAT CAACGGTAGT CCCGGATCAC GTACAAATCT GTCCCTTGCA AGTAGAGTTG CGCCGCCCCG ATGAATCGCC AATGAACGCC ACCCAACGAG TGGTCGAGCG CATGAGGACC GTCGCTCTAC AAACCAAGGT TGACCTCTTT ATCTTGCCCG AGCTATCGCC AGTAGGCTAC AGTGAAGACA CGTTTGCTAA ATACTTGCCC AATACACCAC AAAATCAGCA GTTGTACCAA AATATTGATG ATATCTTTGC CTACCAAGCA CGTCGACTGC AAGTATTTGT TTGCTACGGT ACAATCGGTT GGACTCCAAG AGAGGATGGC ACTCTCAAGC TCTCAATCCG ACAAGTTGTT TTAAATCGAT TGGGGCAACA GATCGCATCG TACGATAAAA TGTATCTTTG CGGTTATGGG GATTGTGCTG AAACGCGCTT TTTCGAGCCA GGGCCTAGAG AGCCCGTTTC GTTTGCGATC GACGGCTTTC GGTTCGGTTT GTTAATATGT GCCGACATAC GATACCCGGA ATTGTCGCGC CTCTTGGTGC GAGATCACAA AGTAGACGTA CTGTTGCAGC CGGCTGCTTT TCTCCGTGAT GTCTCCTTTC GAACGTGGAA GTCCTTTCGC GAAACGCGAG CGGTCGAGAA CTCGGTGTAC TTTGTTGGCG TCAATTACTC AGGAAATGAT TTCGGCGAAA CTTCCGTGAC CCCACCGTGG GTGGACGATT CGCACAAACC AGAAGTCTTG GGGACGGATG AGGGCTTTTT GGTGTGCAAA GTGCAGAAAA ACGAGTTGGA ACACGTGCGC CAGTCCATGC CGTTTTACCG GAATCTTTTT GACATATTCA AGACACTGCC GTGAAGTCAG GTTCATTTAT GCTGTAAGAT GCTCTCGAGA CTGGCTGTGA AAAGATACAG AAGTGTCTTT AGCTTTCAAA TTTTCTTTCC AAGATGACAA AATCGTGGGA GGATCTTTTG GCCCAAACGG GATCGAGCGT TCTTTGTCAG AGAGCATCGT GTTACTAGGG TTCAGTATTG ACAATAGAAT ACAGTTTAAG CAATATTTCA GTGTCACTTC TCTACTAGAG AGAGGTTGCT ATT
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Protein sequence | MMSDRAYSNG NRLPLPDDES TEGSHESSQL VVATKEDEER NEVKQVQLLA RRETNHYFSF AHTIEDASQF HITNMNLAFK NLGEIITTAA QATNASFPFV TVPKFEVYGR HARLQSGIET FTFNPFITDE TRAAWQAYSI QNQGWLKESR DIFLGGDEGN HQDYIDGPIT PIIWQRQADG SPIPTPGPDT YAPVWQTSPP IFNPATVNYN MFSEPFSKRM YQVILNLREA VLSETLDLTR LSGSAVAPED HEIMHDAFVS SIDTTTNVTG YKHPHSVLVQ PIFSELNNRS ATIVGLLQAV IPWDRYFTDL LPQGVSGIHA VLRNTCNESY TYEVKGNSAI FLGPGDLHER HWNHMERVVD MTNYLNPERT LNEPGHCVYR MHVYPTDRFF ASVSNLPTVF TSVIAVSFVL MAVTFFMYDR FVRRRNEKVV VAAARSNAIV SSLFPSNVRD RLFEERDEEK RAFARTQHSG RSKNALRGFL DGEEAELDTD DDGDMYKTKP IADLFPNTTI LFADIAGFTA WSSAREPTQV FILLETLYRA FDEIAKKRRV FKVETVGDCY VAVTGLPDPR KDHAVAMCRF ARDCMYKMHS LTRKLEVTLG PDTADLSMRM GIHSGPVTAG VLRGERSRFQ LFGDTMNTAS RLETTGRRDR IHLSEETAEL LTMAGKAKWI KPREDRVVAK GKGELSTFWL ECGEKSKRSS SSESADETEY PEDTSAASEV SSDVAFNTTG DEDFALRSIS AKVSRLIDWN VDVLSRLLKQ VLARRMAEGS MVVGTSMPLR IPSRAPGKTI LDEVEDYIIL PRFDPKAAKH QIDPDSIDLD PDTEAQLYEY VSTVASLYQD NPFHNFEHAS HVTMSVVKLL SRIVAPMDLD FDNSKDEAVK TKTLHDHTYG ITSDPLTQFA CVFSALIHDI DHSGVPNVQL IKENSRIAKY YKEKSVAEQN SVDLAWELLT EDNYSRLVAT ICPTGSELKR FRQLVVNSVM ATDVMDKDLK EIRNGRWDRA FAEPLSSLSK SPRESVNRKA TIVIEHLIQA SDVAHTMQHW HIYRKWNERL FREMYVAYEL GRAEKNPADF WYEGELGFLD YYIIPLAKKL KDCGVFGVSS DEYLNYAVKN RSEWETRGRD IVVEMITAFR KKDEKHNVTM AVPVNPRFGL LTSFAVQAIG RSNGVGHYHF VSELKLSCHL AVSDLSSKLT NMPSDHSLVT ERFTLQESTG LAPVPRMETM NGATRGPPCP SKILLLPKPS STVEAKSFTN TKQNRISSAN SSHSSARLHL NNHKVEKLHQ GACKATGAHI RVKLLPEHFQ PSDKDVLCGR GRACKMWKGN QDYRELVVSN LEAYASSTSK LHKGMILSNI VQRVRINSPE GGFVKKDSET GRWYEVGDFL AREKTSQYFR DALHEQYSSS AQAKYNRRKK RHTDGNYLET LPPTSSVFPP SAANPIDTAM HESSDVPLVD TIKTAVLEKR QIPPKKRKIE RRPSEDDVAS VLQKMASVKS TVVPDHVQIC PLQVELRRPD ESPMNATQRV VERMRTVALQ TKVDLFILPE LSPVGYSEDT FAKYLPNTPQ NQQLYQNIDD IFAYQARRLQ VFVCYGTIGW TPREDGTLKL SIRQVVLNRL GQQIASYDKM YLCGYGDCAE TRFFEPGPRE PVSFAIDGFR FGLLICADIR YPELSRLLVR DHKVDVLLQP AAFLRDVSFR TWKSFRETRA VENSVYFVGV NYSGNDFGET SVTPPWVDDS HKPEVLGTDE GFLVCKVQKN ELEHVRQSMP FYRNLFDIFK TLP
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