Gene PHATRDRAFT_48036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48036 
Symbol 
ID7203252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp789215 
End bp790336 
Gene Length1122 bp 
Protein Length296 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182299 
Protein GI219123995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.43007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGATTAAAAC TTTATATATC TTTGTTGCAG CAATTCTGCT ATAAATTCCA AATAGCTTCT 
CGCTGACGCC AACCTTCAAA CATATATTGA TAAAGCTAGA TCGATTAGCC CCGACGACAA
CGTAACCAGA AGAATGGGAA CGGGTACTTT GTTTGCTTCC CCTCGAGTAA CAGAATGAAA
ATTATTTGCC GGATGATGCA GCTTCTTCCT TTCGGAAGTC CTTCTTCTCA AACAACACTT
CTGGTTTCTC GCGATAGTCA CACAACCGAA TTCGAAGTTA CATCAAATTC TACGAAGCTG
GTTCAGCAGG AAATGGCTTT CCAAATCTTC TCACTGAACG ACAATGGTGT TGTCGCTATG
CAACAAGGAA ATTATGCTGA AGGGGGAAGA TTTTTCCTTC AAGGTTTGGA TAGTATACGC
CAAATCCTCG AAACGAAGGC TCCAGCTGTT AGTGACTCAG AAAGAGCTAC CGCTTTCTGT
AGCTTCGCAG CGAGCTTGAC ATCTAAAGCT ATCGGCTCCG AAGCATGTTG TGCAGTGGGG
CCCAAGCCAC ACCACACAGC ATTAGAAAAT AGGACATCAT GGCAACTTGA ACAGCAGCAC
GAAGATGCCT TTGATTTTTT TGCAAGGGTC TTTTTGGTAT CTGCTTCGGA CTTAGGTCAA
AGTTCGTTCG ATGCTATTTT GGGAGCAGTG TGTGTTTTGC TCTTGTTTAA CGCGGGAGTT
GCCTTCCATG CAGATGGAGT TCAGACCGGT AGGTCAAAGA TGCTTCTCAA AGCATACAAA
TTTTATGAAA AGGCGGTAAG CATTGTGCAA CAAGAACATC CCTCACCCTG GGAGGCAGGA
AAACTCCCGC TCGTCTACCT TTCAGTACTG GCAAACATGG CCCATATACA GTCAGAGCTT
TTCGAAAGTG ATGCTCTTCA TCAGACACAA CTACTTCTTG AGAAAGTTCT AAACTGTGTT
GTTCATCGCT TCTCGGCGGC CTTGGAAGCG CACGAACTCC GCTTTTTTCT GATCAAGTTA
ATGCTGCTCA ACTGCCAGAC ATCAATTCAA GCGGCAGCTG CGTGAAGGAA GCCTTGAATG
GATTTCTCCT TTCCCAAGAA ATAAAAGCAA TGTAGAGATA AA
 
Protein sequence
MKIICRMMQL LPFGSPSSQT TLLVSRDSHT TEFEVTSNST KLVQQEMAFQ IFSLNDNGVV 
AMQQGNYAEG GRFFLQGLDS IRQILETKAP AVSDSERATA FCSFAASLTS KAIGSEACCA
VGPKPHHTAL ENRTSWQLEQ QHEDAFDFFA RVFLVSASDL GQSSFDAILG AVCVLLLFNA
GVAFHADGVQ TGRSKMLLKA YKFYEKAVSI VQQEHPSPWE AGKLPLVYLS VLANMAHIQS
ELFESDALHQ TQLLLEKVLN CVVHRFSAAL EAHELRFFLI KLMLLNCQTS IQAAAA