Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47967 |
Symbol | |
ID | 7203207 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 572683 |
End bp | 574505 |
Gene Length | 1823 bp |
Protein Length | 587 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182424 |
Protein GI | 219124256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATACCGGACG CTGGGTGATG ACGACACGAG TCACTGGCAA CGAGAGAAGA GGAAGACAAC TTCTGCTACG ATTTTCCGGT TTTCTTTCAG CTGCCCTGAC GGTGATGGCT TTGATCACGG CGACACGAGC ATTGGCGCCG GTTGTTGCCT ACATCGCACC ACAACGAGTA AGGTCACATT TCATGAGGCG CGCGTTTGCT TCCGGGAACT GTCGCTCCAG GCGTTTCAGC GTTCTGCGTT CGACAGTCGG AACGGAAACG CGCAACGAGA ACAACATCAC TACACCTTAC CATTCACCCT TGCCGACGTC TAGATATGTG TACCAATCCT CTCGCACTCT CTCTTCACGT AATCCAGCGC TGCCTTTAGA ATCCACGCTT ATGCACTCGA ACGCAAACGA ATTGACAGAT GTCGAACTGA AGAACTTGGT TGCTCATTGG AGAGACCACC CTGTCTTAAA TCCGATGGTC ACTTTCCGCT CATGGGTCGT TCCTATCAAA GGCAAGATGA TTCAAGCAAT TCTCAATTCT AAATCCCTGC AACCCTATCT AGCAAGCAGA CACGAACTGC TGCAAGAAAT GCATGTGAGA CTGAAAATCG TTCGCGATTA CACCGACTCT ACCGATGGCA CAGAAAAATT GATACTCTTG CATCCCGATA CGCCACCACT GTCGGAACTT CCCGCAGATG TCCAGCAGCT ATTACGCAAT TGTCAGATTC ATGAAAATGG TCCCGTCATG CCTACGAAGT TTACGTATAA AGACTTTACG GCATCGTACA TTCTATCTCA GCTGTTGCCT ATAGCTGTCC ATCCGCCTCC GACGGCCTTT GAGACCATCG GACACGTGGC GCATTTAAAT TTGAAGGAGC GTCACTGGCC TTACCGCTTT CTTATCGGCC AAGTGCTGCT AGAAACGTTG CCCTTGATAG AAAGCGTCAT TAACAAAGTG GGGGAAGTCT CGGGACCGTA CCGCACCTAC GATTTTGGAC TGCTTGCGGG TCGCAATGAT ACGCGGGTCA AGCTCACAGA ATCAGGCGTG CAACTGCAAT TCGATTTAGC GGACGTCTAC TGGTGCTCAA GGCTTTCGGA GGAACGACAA CGGCTCCTTC GTACCTTTCA GCCTGGGCAG ATCATTGCCG ATCCCTTTTG TGGAGTGGGC GCTCTATGTC TGCTGGCTGC ATCGTTGCCA CAACGGAATT GCACGATCTG GGCCAACGAC TGGAATCCAA AGGCGGTGGA ATACTTGCGC GAGAATGCGC GGCGGAATCA TGTGTCCGAC CGCATAGAAC GGCTACAATG CGGAGATGCC TACGACTTTC TTATGGATAT GGGTCTACAA CAACACCAGA AAGCATCGAC CAGATCAAGG AAAGAGGATG TTACGAACAA GGATGGGAAC CATGTAACTC CAACCGAACC TATGCGACTC CCGGATCACG TCGTAATGAA CTATCCAGTA GAAGCACCCA AATTTTTGGG TGCGTTACGG TGGTGGCCTG TCCCGCCAAG CTCAAGAAGG GGTAGCACCA CACGCGATGG TGGTATCGGA TCGGTCATCG TACCACGTGT TCACGTTTAT ACGTTTGCCA GGGCTGATCC CACAACAGAC CGAGATGCCG AAGAGGTGGC GGTAGATCTG GTTGCGGCCA ATTTGTTGCC ATTGGGAAAC ACGATACACT GTCGGACCGA AATGAACGAA GACTACGATT GCGACATCCA GGTCCATCCG GTGCGTGATG TCGCACCCGG AAAGGTCGTC CTGTGCGTAA GTTTTTCTGC CACACCCAAG CTACTTCGGT ATATGCAGGG CGACTTTCGA TAG
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Protein sequence | MTTRVTGNER RGRQLLLRFS GFLSAALTVM ALITATRALA PVVAYIAPQR VRSHFMRRAF ASGNCRSRRF SVLRSTVGTE TRNENNITTP YHSPLPTSRY VYQSSRTLSS RNPALPLEST LMHSNANELT DVELKNLVAH WRDHPVLNPM VTFRSWVVPI KGKMIQAILN SKSLQPYLAS RHELLQEMHV RLKIVRDYTD STDGTEKLIL LHPDTPPLSE LPADVQQLLR NCQIHENGPV MPTKFTYKDF TASYILSQLL PIAVHPPPTA FETIGHVAHL NLKERHWPYR FLIGQVLLET LPLIESVINK VGEVSGPYRT YDFGLLAGRN DTRVKLTESG VQLQFDLADV YWCSRLSEER QRLLRTFQPG QIIADPFCGV GALCLLAASL PQRNCTIWAN DWNPKAVEYL RENARRNHVS DRIERLQCGD AYDFLMDMGL QQHQKASTRS RKEDVTNKDG NHVTPTEPMR LPDHVVMNYP VEAPKFLGAL RWWPVPPSSR RGSTTRDGGI GSVIVPRVHV YTFARADPTT DRDAEEVAVD LVAANLLPLG NTIHCRTEMN EDYDCDIQVH PVRDVAPGKV VLCGDFR
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