Gene PHATRDRAFT_47861 details

Gene Information

• Locus tag: PHATRDRAFT_47861
• ID: 7203084
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 265564
• End bp: 270456
• Gene Length: 4893 bp
• Protein Length: 1234 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002182190
• Protein GI: 219123768

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.090651
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGTTGC GTCGTCGTCT GACCAAGCCC GGTCGTGAAA GCCTGAAGGG GTGGGAAGGT 
TGGGGTTCCG CTCCGCACAG CGACCTCCTC GATACAGCAC GAGAGCCTCT TTCCCAAAAA 
GGGCCTGTTT ACTATCGTAC CTCGCTACCG TGTCGACTAG TCGCTCTACT TGGCGCTGGT 
GGGTCTCCCT TCTTACGTTT ACACGTCCCG GCACGGTAAA AATAGTAGGT ATACGCCCCC 
ATCGCTGCCT GCAGAGTTGG TGGTACACAA GTTGTGCGTC TATTGATCTA TCTATCTATA 
TCTCTATCCA CCCCAGGGTC CTTTGTGGGC GTGTTGGTAG AAGAGAATTA CGAAACTTCT 
TTGGGATAGC TTGGTGTCCC TTTTGAGGAC TCAAAAGACC GTTCAGGAAC CTGCCTACCA 
ATCCCCATTC GCGTCACTCT GTGTACGTTG ATTACCATCT TCGCGATTGT GCAGACAGTG 
TATCGCACTT GCAGTCTTGT TGGGGTTTCT GTTCTTGATT GATTCGGTCC TTACGGTGTT 
ATCGTAGAGT CCACCGACGA AGACAGGGAC ACACACGTTG GTTGTTAGAG ACTGGACGTC 
CGACAATACT CGGTACGGCG ACGACTTGTG GTCTACTTAT TCGTGCCGAG ACTGGAAGAT 
CCCGCCCGTA CACTTGGAAA GACACGCACA CTCGCTCAAA AAAGCACAGA CATATACATA 
CACAGTATGC CTGTTCGACC CAAACGCTCG TTGGCCAAGT ACTTTCACGG TGGGGATCCT 
TCGGATGTCG TCGAATGCCC AGGCTACCGT GCCGCCAACA ACGGCAATCA ACACCGTAGC 
GTACACAACG CAACCATGGA GGCACTCGTA CGTGGTTCCC CCGTCGCCGA CACTGCCAAT 
GGCGGGGGCG TGCTCGTACC GTCGGTGCAA CCGCAGCTCT CGGCTGTACG GCATAGCAAC 
GGTTGTTTGC ACTGCCACAC GGAAGACACC TCCGAAAACA ACGTGCAAGT CCGCTGCGAC 
GAATGCGGCG CCTATATTTG CGACGAATGT CACTGGTGTC ACGAATATCA GGCCAATCAC 
GAGATTCGAG TTTGCGATCG ATGTGACGGC TTTTACTGCA AGGGCTGCGA CGAAATGGAT 
CAGTGCGAAG ATTGCGGCGA AGTTGTATGT GCAAGCTGTA GTACTCTCCT CAGTTGCAAA 
TTTTGTGGTG GAGGGCTTTG TGAAGAATGC GCGACGGCCT GTGGACGGTA CGTAGGCTCT 
GGAGTATTGT GCAACCAAAC ATGGACCCTT TGAACACTAT ACGAGAGGAT ACGTTTGTAT 
TGCATACGAA TTGTTCTTCT CACACGATTT TTCTCTCACT TTTGGCAGTT GCGGTATTGT 
GTTATGCAGC CGGGACGCCA AGTTTGCGGT AGAGTGCGAT ACTTGTCGAC TGAGTTACTG 
CCTGGTATGC TTGGCTAGTG GGGTCAAGGA TCCTTGCGTC CGTTGTGGAC ATCGCCCTTC 
GAAACGCATG GAGCAACTCG TACACCTGCG ACTGAAATCC ATTTACAAAG CATTCAAACA 
AAACAGCGGT TCCAACGGTC TGGAAGTCCG TGCTCCGCAC ACGGCTACCA AAACGTATGC 
GCGTTTACGC GAAAACGACG AACCTTGCGA CAATCCGGAT TCACTATTAC AGGCTGCCGC 
GTCAGTGGTA GCGGCCAAAC ATCCGGAACT ATTGACTGCA CCGGAAGATG TCGAATCCCA 
GCTAGTCCGA CTCGACTTGG AACAAGAAAA AGCCGATGCA GCCGCGGCGG CGTTATTGGC 
GGAACTTGAA GAGGAAGAGC ACGCCGAACA AGTCAAGAAA AATAAGAAAA AGAAACGCAA 
AGGTCGCAAC GGCAATAAGA AAAGCGAGGA AGAGGTTGAC AAAAAGCTTC CAGCAAAAGA 
AGATCTACTT CCGCAGCCGT CCAGCCCGGA ACCAGTATCA GTAGCTACGG ATTTGCATGT 
AGTAGCTACC TCACCGTCAA TACCAAACTC GCCTGATCCT CCCAAAGCTT CGGCCGTCGA 
TTCGATGCAA CAAAAGCTTT GCGACCTTGT GATGAATGAG GATATGAAAG GGTTAGAAGA 
TTTGATGGCC TCTTTAAAGG GTGTTCCGGG ACAAGCAGCC TTACGCAAAA ATGCAAAAAA 
AGCGCTGAAA CGACTACAAA CACCAGAGGT AGACGCCCAT ATTATTGAAG CCAGAGAAAT 
TACCACTGCT ACTCTGACGA CACCTTTAGA CGAAGCAACC GTCCCTGATG GCGCTGCCAC 
GCCTCCGCCT CCCACCAGCG ACTTGCTTCA CGTTATTTCT TATACACACA ACAAATTGCC 
GACTCAACCT TCCAACGTCT CACATCGTGC ACGCAATGCC TCCGCTACAC CCAAGACGGA 
ATGTGTCCTT CACATGGCAT CCTCGATTGT CGGTTGGGTA ATTGGGAAAG GCGGTCAACG 
TATTCGCGAT CTTATGGAGG AATCCGGAGC CCGAGTTTGG ATCGACCAAG AGAATCTAGG 
CAAAATGGAT CCCCGTATTG TTTACGTTAG CGGTCATCGG AAAAACGTGG ACTCGGCGGT 
ATATTTGCTG CAAAAACTCG TTGCGCAAAC ACCTACCGAT CCTTCAGCGT CGAATCAAAA 
CACACTCTTG GGGCTTAAAA GCGACAGCTC GTTAGATCCT GGGATTGTGC CATCGCGGCC 
GTCGGATTCG CACGAAGGCA CGACTAGTGT GCGTGTGCAA ACTTACGGTG TGCATGCTGA 
TCGAGCCAGC GATACTACGG GCAAAGGCAA TCATATTCTC ACCTGCGATA AACGTTTCGT 
TCCTCTTTTG ATTGGGAGGC GAGGATGGAC AATTAAAAAC ATCCAGGATT CATCCGGGGC 
GCGTGTTGAT ATAGATCAGA ACGTAGCACC TCCCCGTATT ACAATCTCAG GTGCGGAAGA 
ACAGGTTTCG ATCGCGGTAG AAATGGTGCG GGATGTGTTG AGCTATCCAC ATTCGCAACT 
TCAAGGACGC GCTGGCAGGG ATGAATGCGA TCACGCGGCA GATCATGAAA GGAACACTCC 
CGGCGTTGAA TTGCAGATGA GACTCTACTT CCACCGAATG TATCACCAGT GGCCGACAGG 
AACAGGAATT CTCCGCCGTC TTCGTTGATT ATGCCAGACG ATGTTCAGAG CACGATTTCG 
GCTTCTTCTT CTTTGTCTTT GACTCCAGAG CCATCGACAG CGTCTTCGAA CAGAACCAAT 
TTGCACGTTC CTTCTGGACC TATGTTACCG CCCGCGTACA ACGCCGGACT CTATACTTCC 
GGTGTCAATG CTAGATCTAC TTCGTTTCAG CCAGGTTTTA ATGCGTCAAA CGGGCCACTT 
TTCACTGGCC ACAGTCCGAG TATGATTCTA CCGGCGGAGC AATTGTTTCG TGTGCAATCG 
GGTCAGTACG CAGAATTTCA GCAATCGACA AGGGATATAG GTGGCGCATC TTTATTTCCA 
GATCAGAATA TAGGCTTTGC TGCTCCTGCT AACGTTCAGC CTCCCAACTA CCTTCAGAGT 
CAATCTTCCT CTCCCTTTGA GTCAAATCCA CTGGGATCGT ACGGAAACAT TCCCTCCAAT 
CAGCAGCAAG CAGGGCTGTT TCCTCTTTCA CAACCCGTAT TTTCTTCCCG GAATGAACGA 
ATTATAGGCC AGTCAACAGC TGTCGATGCG CTAAGGTCGA ACTCATTGGA TCCGAAAGAA 
AGCGCGAGTA TGTGGGAACA ACTGGGGGGC GCAGCGGTTT CTCAACCGGC TGTTGCTAGC 
GGAGGCAGTG CCGGGTTCCA CTTGGATGCC GCCGTCGAAT TTCTGCAGAA CAGCAATTTG 
GGGCCACACT ATTCGCCAAT TTCCAGTGAT GCCGATCAAA ACATTGGGCA GTCGACTGGT 
GGATCTGTGA ACCCTCAAAG ATTTGGACCG TCGGCTAGGG GAAAGCGTAC CCCAGCACAC 
GGGAAGGCTG AGTCTCAGAT GGTCGACAGC TTTTTCGGAC CGAACAAGCA AGACATCAGG 
GACAACAGGG TTTTGAATGG CTTGTCAGGT CTCTCCGTTG CAGACAAAGA TGTATCTACT 
GGTCTTTGGG GTGTCCCTAT ACAAGCACTG CCATCACTTG GCGAGGTGGA AGGAGCGACT 
ATAAACAAAT CCTCTGCTTT GTATGCAGCA ATTCAACCGA ATCTTGCGAA TAAAAAAGAA 
CAACGCCCCG AGCATTCACG CTTTAATTGG GGGCCATGAA GAATTGCAAA ATGTTTTGCT 
TGATTTTACT TTCTTGCTGT TTCTCTACCC TTTAGACGTA CTGCCATTGT TTTGGTGCGG 
GTTGGATTGC AAGTGGAATA TTATAGACTT CTGGATTGGC AAGTAAGCGA GGCAAAAATA 
CACACGAATA GCATGGAGAA AGCTGGCTAA AACAGGGAGA GATGCGGGTC GACATACTGC 
TTCCGTGTCG ATCTAGACTT GGTTTCTACA TACTGCTTCT TTGTACAAAC CTTGATCATC 
TCTCACCAAT AATTAGCTCC TGCTTACTAG CTCAAAGTTT GTCTTTTACA CCACATCAGA 
CACATCTTGG GAGTATTCCT GCACTGTCGT AGATGGCTCG TCCGTGGCGA CATGAACTTC 
GGAGAGCATC ACTTCTTCCA AAAGTGGGAA GACTTGAATT CCGTTCTTGT TCCATTCTAA 
TGATCCTGAT GTGATAACAG AAACAACTAC TTCCCACACG TACGGAACGA AAAAGATTTC 
AGGATCCGCT TCCTCTTCGT ACGTAAAGGT GAAGTCTTCG TTTTCGCTTC TTTTTCGACG 
TTCGGTCACA ACGGCTTTGA TGCGGTCGAT GTTCTCCCCT AGCACTTTCA AAGCCTTAGT 
TGCCGTCCGG GCGTCACCAT TTTCTTCAAT AAT 

 

Protein sequence

MSLRRRLTKP GRESLKGWEG WGSAPHSDLL DTAREPLSQK GPVYYRTSLP CRLVALLGAG 
GSPFLRLHVP ARLVSLLRTQ KTVQEPAYQS PFASLCSPPT KTGTHTLVVR DWTSDNTRMP 
VRPKRSLAKY FHGGDPSDVV ECPGYRAANN GNQHRSVHNA TMEALVRGSP VADTANGGGV 
LVPSVQPQLS AVRHSNGCLH CHTEDTSENN VQVRCDECGA YICDECHWCH EYQANHEIRV 
CDRCDGFYCK GCDEMDQCED CGEVVCASCS TLLSCKFCGG GLCEECATAC GRRDAKFAVE 
CDTCRLSYCL VCLASGVKDP CVRCGHRPSK RMEQLVHLRL KSIYKAFKQN SGSNGLEVRA 
PHTATKTYAR LRENDEPCDN PDSLLQAAAS VVAAKHPELL TAPEDVESQL VRLDLEQEKA 
DAAAAALLAE LEEEEHAEQV KKNKKKKRKG RNGNKKSEEE VDKKLPAKED LLPQPSSPEP 
VSVATDLHVV ATSPSIPNSP DPPKASAVDS MQQKLCDLVM NEDMKGLEDL MASLKGVPGQ 
AALRKNAKKA LKRLQTPEVD AHIIEAREIT TATLTTPLDE ATVPDGAATP PPPTSDLLHV 
ISYTHNKLPT QPSNVSHRAR NASATPKTEC VLHMASSIVG WVIGKGGQRI RDLMEESGAR 
VWIDQENLGK MDPRIVYVSG HRKNVDSAVY LLQKLVAQTP TDPSASNQNT LLGLKSDSSL 
DPGIVPSRPS DSHEGTTSVR VQTYGVHADR ASDTTGKGNH ILTCDKRFVP LLIGRRGWTI 
KNIQDSSGAR VDIDQNVAPP RITISGAEEQ VSIAVEMVRD VLSYPHSQLQ GRAGRDECDH 
AADHERNTPG VELQMRLYFH RMNRNSPPSS LIMPDDVQST ISASSSLSLT PEPSTASSNR 
TNLHVPSGPM LPPAYNAGLY TSGVNARSTS FQPGFNASNG PLFTGHSPSM ILPAEQLFRV 
QSGQYAEFQQ STRDIGGASL FPDQNIGFAA PANVQPPNYL QSQSSSPFES NPLGSYGNIP 
SNQQQAGLFP LSQPVFSSRN ERIIGQSTAV DALRSNSLDP KESASMWEQL GGAAVSQPAV 
ASGGSAGFHL DAAVEFLQNS NLGPHYSPIS SDADQNIGQS TGGSVNPQRF GPSARGKRTP 
AHGKAESQMV DSFFGPNKQD IRDNRVLNGL SGLSVADKDV STGLWGVPIQ ALPSLGEVEG 
ATINKSSALY AAIQPNLANK KEQRPEHSRF NWGP