Gene PHATRDRAFT_47805 details

Gene Information

• Locus tag: PHATRDRAFT_47805
• ID: 7203049
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: -
• Start bp: 99172
• End bp: 101302
• Gene Length: 2131 bp
• Protein Length: 683 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002182324
• Protein GI: 219124047

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.950548
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAACC GATTGTGTAC GGTTCTTTTA GCTGCCGGAG TTTTCTCCGA ATCGCATGTG 
ACCTTCGCTA GCCAAAACAC AGCGTCGGTT AGTGACTTCC ACTCGGTTCC TGCTTTCACG 
GTGGAAGAAC TATCTTTTGG TCACCGAACC AACGATCTTG CTGAAGCTCT TCGTTCTACA 
GGGATGATTG CTGTGAAGCT TGATCATCAT GTGAAGCACA ACGATTTTGA TATTGCCGAA 
TCTCGAAGAA TTGCTTTGGG TGGCTTGTGC GGCTGCGCTA GCAGCGACGC TTCGTCGTTG 
TTCCAATCTG TTTCGGGAGC TGACACTTCT CTACTCTCTG ACGGATTGAC GACGCGCAGC 
ACATTTGCTA CGGCTACAGT AGGAGGCACT CCTTTGCAGC TTCCAGTCGA AGGTCTCGAA 
AAGGCATGCG GAAGGGAGAC GACCGCAGCC ATGGAATCCT TGCGCGACAA CGTTGCAGTT 
GCTTCCCGAA GCTTCGTGTC TGCCGTAGAC CGTCTACGCC GGGATTCTTC AGCCCTACCC 
AACAGTCTTG CCCCTATTCT GCAAAATATT CAAGGTGGAA CTTACTCATC GCTCGCGTCC 
ATTGTCAAAG CTTCTACGCA CCTTGAGCAC TTCCATCTCT ATTCCAAACA ACAAAGACAA 
GCTCCCAGCG GGATGTCCCA AGCATCGGAT ATGGAGGAAG TCCTCCAGGT CCACACTGAT 
GCAGGCCTCT TTTTGTCTTT TGTTCCGGGT CTCGCCTGTG GGAATTCTCA CACCAGCGAA 
AGCGAGCACT TTTCGGTTCT CATTCATGGG AAGCTCCATC GCGCTGTCTT TCCTCCTGAC 
TCGGTTGGTA TCATGCTCGG AGCTGGAGCG CAGCATTGGC TGAAGAACGT GGATTCTTTG 
GAACTCCATG CCACTCACCA TGCAGTTCAA ATGCCCAGTG GTTCGGCACG TGCCTGGTAC 
GGAATGAGTA AGTCAATCAG TCTATACGGG AATAGAACGA GAAATGAATT CACCTCACAA 
GCACCTATAC TTTTTCTTCA TTCAAGTGCA TCTGGTCCCA CAGAACGCGA TAATCCAAGA 
AGACCCCGAG CCAAAGACCT TTGCTGATAT GCGAAAGGCA ATGGTGCTTT CCGGCTCCAA 
GACACACAAG TACGGCGGTG GCTCGCTCCA GACCGACGAA GCCCTTTCTA TTGGTTGTGG 
TGCGGGGTCT CAAAAAATCA ACGATCACAA TTTCGGATCA TTCGGCGTGT CAGCAAGTCG 
TCGACATCGC CGTCGTCTTC AGATGGTTGA TGATGCAAGC GTCTGTAACA ACTCGACAAA 
TTTCTATTGC TGGATGAGCT GCCTTGACAT TCCAGAAGCG CAAAATGCCC AAGGTTACCT 
TAACGAAGGA TACTCGTTGT ATTGCCTGGA CCCTGCAACC TTGTCAGCTT CTGGAAATCG 
AGCATCAAAA GCCATGGAAC CTTGCATCGA GGATGGAGTG GTGGGTCTCG CCATGAATGA 
AAATTGCATG GGAAGCTGGC AGCCAACTGC TCCTGGGGTT GTTGCTCAAG AGCTTGCCCT 
CAACTTTACC ACCTCCGAAG AAGAGCCGTT CTGCTACGGT GGGACGTCCA TGTACATGGA 
CGGTTTCCAC TGGCTAGACT CAACCTGCGT CATCTATCTC TTCCCCGAAT GGGTTCTCAG 
TACACCTGGA AAGTTGGTTG CGGCATGTGT AGGATCGATT TTCTTTGGAA TGTCTCTTGA 
GGGTGTCATT CGAGGTCGTC GTGATCTGGT TCAGTCTATT GCTGTTGGCT GGAAGCGCCT 
CTTCATTTCG TCCGGCATCT ACGGTCTGCA GCTTACAATG GGATACTTCA TCATGCTCGT 
TGTCATGACC TATTCAGGAC CACTTTTCAT GTGCGTCGTT CTTGGCCTTA TGTTCGGTCA 
TATTGCCTTC AACGCAAAAG ACGTTTTGAA AGCCAAAAAG CAAGAAACTA AAGAAGGTCA 
AGAAGAGTGT TGCGGAAAAG AAGATGAAAG CGAAATTACT GACGAAGAAT TGTCGCCTTG 
CTGCCAGGGT GGCATGGAGA AGAACAATGT TACAAAGGTT TCCGCGAATG TTCCGGAAGG 
CAGTACACCG TGCTGTCAGA ATTTATTGTA G 

 

Protein sequence

MTNRLCTVLL AAGVFSESHV TFASQNTASV SDFHSVPAFT VEELSFGHRT NDLAEALRST 
GMIAVKLDHH VKHNDFDIAE SRRIALGGLC GCASSDASSL FQSVSGADTS LLSDGLTTRS 
TFATATVGGT PLQLPVEGLE KACGRETTAA MESLRDNVAV ASRSFVSAVD RLRRDSSALP 
NSLAPILQNI QGGTYSSLAS IVKASTHLEH FHLYSKQQRQ APSGMSQASD MEEVLQVHTD 
AGLFLSFVPG LACGNSHTSE SEHFSVLIHG KLHRAVFPPD SVGIMLGAGA QHWLKNVDSL 
ELHATHHAVQ MPSGSARAWY GMMHLVPQNA IIQEDPEPKT FADMRKAMVL SGSKTHKYGG 
GSLQTDEALS IGCGAGSQKI NDHNFGSFGV SASRRHRRRL QMVDDASVCN NSTNFYCWMS 
CLDIPEAQNA QGYLNEGYSL YCLDPATLSA SGNRASKAME PCIEDGVVGL AMNENCMGSW 
QPTAPGVVAQ ELALNFTTSE EEPFCYGGTS MYMDGFHWLD STCVIYLFPE WVLSTPGKLV 
AACVGSIFFG MSLEGVIRGR RDLVQSIAVG WKRLFISSGI YGLQLTMGYF IMLVVMTYSG 
PLFMCVVLGL MFGHIAFNAK DVLKAKKQET KEGQEECCGK EDESEITDEE LSPCCQGGME 
KNNVTKVSAN VPEGSTPCCQ NLL