Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47716 |
Symbol | |
ID | 7202898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 619450 |
End bp | 620534 |
Gene Length | 1085 bp |
Protein Length | 304 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182103 |
Protein GI | 219123585 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCTTGTTCCG ACTTTAGTAT GAGACAGTTA AGTCTTTCGC CTCTGCTCCT TCTGACCTAC GCAGGCGTGT CGTTTTCGCT GCATCCGACC CTGCTGCCAG CGAGAACGAG GAGGTCTGCT TTCAAGTTTC GGACGACCGC GCCGATCCCG GTGCAACACT TTTCTCGTAT ATCGCTCTCC GCTACCGACG ACGACGACCA AAGTGCAGAG TCTCCAGACA AAAGTGGTGA AGCTACACCA ATCGACGTCG ATCAGGATGA TCGACTCTAC CGAATTCGTT TACCGCGGGC TGCGGGGATC GAGTGGGGCA CGGACCTTTC CTTCGCCTTT GTCTACGTCC GTGGCCTCGA ACCAGCACAG CCCGCCGACA TTGCCGGCGT GGAAGTGCGG GACCAACTGT GTGAACTCCA GGCGGTACAA GAGGGGTCGT CGCCGGTACC ATTGATTGGC GCGCCTTTCG ACTACGTCAT GGAGGCCTTT GCGACACTCG ACAAGACCGT AACGACGGTG GATCTCGTCT TTTTCCGAGG GGCCAAGGAG GAGCTCAAGG CCCTCTGCGC GGGAACGGCA GTCACGAAAG AGCCGGAAAC GATTACGGTC ACGGTGATTG AAAATAAGGG AGCGAATAAC GAAAGGAAAC GTACTCTCAC GGCGCCGGTC GGCGTCAACG TCCGTGAACT CTGTGTAGAC AACGGCATCA ACGTCTACCA GAGTGTCACG CGCTGGACCA ACTGCAAAGG CAAGCAGCTT TGTGGTACTT GCATCGTTAA CGTCTCGGAC GGAGCTATCC AAACAAACCG CAAAAGCATG GACGAAGATT CCACTTTACG GGAAAACCCC GACTCCTATC GGCTTTCCTG CGTGACCTTT GCCTACGGTG ATGTAACGAT CGAAACGTTC CCGCCGGTCC AAGCGTCACA GTGGACGCGG TAGCTATTCG GAATCGAGTT CATGCGAGCA ACTTTTGCTG CGAATCGCCC ATACTATCGA TTTACTCGAA AATGACTTGA CGAAAGATAG ATTATGATAG AAAGAACCCG GACTTTTTTC GTAGTCCCGA TGCTGATAAT GAACCATTTG CGCTT
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Protein sequence | MRQLSLSPLL LLTYAGVSFS LHPTLLPART RRSAFKFRTT APIPVQHFSR ISLSATDDDD QSAESPDKSG EATPIDVDQD DRLYRIRLPR AAGIEWGTDL SFAFVYVRGL EPAQPADIAG VEVRDQLCEL QAVQEGSSPV PLIGAPFDYV MEAFATLDKT VTTVDLVFFR GAKEELKALC AGTAVTKEPE TITVTVIENK GANNERKRTL TAPVGVNVRE LCVDNGINVY QSVTRWTNCK GKQLCGTCIV NVSDGAIQTN RKSMDEDSTL RENPDSYRLS CVTFAYGDVT IETFPPVQAS QWTR
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