Gene PHATRDRAFT_47716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47716 
Symbol 
ID7202898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp619450 
End bp620534 
Gene Length1085 bp 
Protein Length304 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182103 
Protein GI219123585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTTGTTCCG ACTTTAGTAT GAGACAGTTA AGTCTTTCGC CTCTGCTCCT TCTGACCTAC 
GCAGGCGTGT CGTTTTCGCT GCATCCGACC CTGCTGCCAG CGAGAACGAG GAGGTCTGCT
TTCAAGTTTC GGACGACCGC GCCGATCCCG GTGCAACACT TTTCTCGTAT ATCGCTCTCC
GCTACCGACG ACGACGACCA AAGTGCAGAG TCTCCAGACA AAAGTGGTGA AGCTACACCA
ATCGACGTCG ATCAGGATGA TCGACTCTAC CGAATTCGTT TACCGCGGGC TGCGGGGATC
GAGTGGGGCA CGGACCTTTC CTTCGCCTTT GTCTACGTCC GTGGCCTCGA ACCAGCACAG
CCCGCCGACA TTGCCGGCGT GGAAGTGCGG GACCAACTGT GTGAACTCCA GGCGGTACAA
GAGGGGTCGT CGCCGGTACC ATTGATTGGC GCGCCTTTCG ACTACGTCAT GGAGGCCTTT
GCGACACTCG ACAAGACCGT AACGACGGTG GATCTCGTCT TTTTCCGAGG GGCCAAGGAG
GAGCTCAAGG CCCTCTGCGC GGGAACGGCA GTCACGAAAG AGCCGGAAAC GATTACGGTC
ACGGTGATTG AAAATAAGGG AGCGAATAAC GAAAGGAAAC GTACTCTCAC GGCGCCGGTC
GGCGTCAACG TCCGTGAACT CTGTGTAGAC AACGGCATCA ACGTCTACCA GAGTGTCACG
CGCTGGACCA ACTGCAAAGG CAAGCAGCTT TGTGGTACTT GCATCGTTAA CGTCTCGGAC
GGAGCTATCC AAACAAACCG CAAAAGCATG GACGAAGATT CCACTTTACG GGAAAACCCC
GACTCCTATC GGCTTTCCTG CGTGACCTTT GCCTACGGTG ATGTAACGAT CGAAACGTTC
CCGCCGGTCC AAGCGTCACA GTGGACGCGG TAGCTATTCG GAATCGAGTT CATGCGAGCA
ACTTTTGCTG CGAATCGCCC ATACTATCGA TTTACTCGAA AATGACTTGA CGAAAGATAG
ATTATGATAG AAAGAACCCG GACTTTTTTC GTAGTCCCGA TGCTGATAAT GAACCATTTG
CGCTT
 
Protein sequence
MRQLSLSPLL LLTYAGVSFS LHPTLLPART RRSAFKFRTT APIPVQHFSR ISLSATDDDD 
QSAESPDKSG EATPIDVDQD DRLYRIRLPR AAGIEWGTDL SFAFVYVRGL EPAQPADIAG
VEVRDQLCEL QAVQEGSSPV PLIGAPFDYV MEAFATLDKT VTTVDLVFFR GAKEELKALC
AGTAVTKEPE TITVTVIENK GANNERKRTL TAPVGVNVRE LCVDNGINVY QSVTRWTNCK
GKQLCGTCIV NVSDGAIQTN RKSMDEDSTL RENPDSYRLS CVTFAYGDVT IETFPPVQAS
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