Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47603 |
Symbol | |
ID | 7202814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 245781 |
End bp | 247122 |
Gene Length | 1342 bp |
Protein Length | 410 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182034 |
Protein GI | 219123443 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00466519 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAACTCGAAT TTTTCTGTTG TGGCATTAAT ACACCTCCAG CACTCAAGTT CATGCACTTA TCAATAATCA CGAAAAGAGA AAGGCTTGCG GGAAAAGCAG AGGGAAGCTA TGATACGAAA GCCGCGAAGA TCCATCGCTC CATTCAGGAA GGCCCAACCG ACTCGTTCAA CAAATGGCGG TGAGAAGAAG AAAGAGAAAG GAAGAATGTG GAAGGCTACA ATATTGACAG TCTTTGGAAT TACTGCGATC TGCTCTGTAT TTGTGAAGAC AAGTATCTGC ATCTTTCCAA GTAACCCAGA TTCGAAGAAG TCGTTGGCAA CAAAGGCGTC GTCGTCACTC CTGGGTGCGA TTAGAGCACG GAGCGCCCAT TCCATGAGCA AGTCGTTCGA GATCCCTCTG TTACCCTTAC CAAAAAAGAG CGAAATCCTT GTTCCCACTG TTTCAAGAAA CATGAACCAG CCTTCGCTTG CAGTAAACCG TAACCGAACC CTTGTTGTTC TTATTGGCGA CTTACGGTGT GGAGAGACAG CCTGGAGATC TCTGTATACG AACGTACTTG ACGCCAACCA GGCCGATTTG GCCCTTTTTG TTCAGATTCC TGATCAAGTG GAATATAGCA ATGCTTCTCT GTTCACAAGG GCAAAACACA TTGAGTGGAT TCCAAGATAC GACGATTGGG CCGATGCAAT TGACCTCATC GGGGGATCTG AATGGAGGAA AGCCGCCTTC GAATTCTATC CTTCGTCGAT CTACCCTCTT ATTCTTGGCG GGGTGAAAGG GTACGATGCG AGTGCAGCCA TGGTGCACAT GTTTCGATGG TTTGTGGCAC AGCGTATCCA AAAAGACGGC TGGGAGCAAA CATATGATCG ATTTATCATT ACCCGTACAG ACCAGTTTTA TAAATGCCCA TTAAAGCTTT CAGAGCTACC CTCCGAGAGG ATCTGGTTAT CGGAAGGAGA GAACTATTGG GGCTTTAATG ACCGCTTTTA CACTGCACCG TCCAGCCTGA TTTTGAAAAC TCTGGACGTT ATGCCTACAT TTCTGAGACA TCCTGACATG TTTGTCAACG TGACTCCAAA GGAAAACATG AACTCGGAGA TCTTTCTTAA GACAACATGG ACCAAGCTTG GCTTGGTCCC GCTAATTGGA CGCTTTAGAC GCATTCTGTT CACATGTTCT ATTCCAGTTG ATACAACAAG ATGGTCTACT GGAAAAGAGC TTGCTCCGGA AGGCGTTCTT TTGAAATATC CTGATGAGTA CAAAGTAGCC ACTGCTAGCT GTGAACGACT ATCCAATGGT AATGTTCCCC TCGTGCCCAA GCGTTATATG AACATAGTCT AA
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Protein sequence | MIRKPRRSIA PFRKAQPTRS TNGGEKKKEK GRMWKATILT VFGITAICSV FVKTSICIFP SNPDSKKSLA TKASSSLLGA IRARSAHSMS KSFEIPLLPL PKKSEILVPT VSRNMNQPSL AVNRNRTLVV LIGDLRCGET AWRSLYTNVL DANQADLALF VQIPDQVEYS NASLFTRAKH IEWIPRYDDW ADAIDLIGGS EWRKAAFEFY PSSIYPLILG GVKGYDASAA MVHMFRWFVA QRIQKDGWEQ TYDRFIITRT DQFYKCPLKL SELPSERIWL SEGENYWGFN DRFYTAPSSL ILKTLDVMPT FLRHPDMFVN VTPKENMNSE IFLKTTWTKL GLVPLIGRFR RILFTCSIPV DTTRWSTGKE LAPEGVLLKY PDEYKVATAS CERLSNGNVP LVPKRYMNIV
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