Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47351 |
Symbol | |
ID | 7202406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | + |
Start bp | 369864 |
End bp | 371181 |
Gene Length | 1318 bp |
Protein Length | 359 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181541 |
Protein GI | 219122416 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAAGAGCAAT CCATGTAGGT ACGATGAGGT GAATTTGCTA TCACCCTCCT CAGCGTCTTA TGAAGTCTTC TCGGTTGACA CATGAACGTC TTATCCCTTT GGCACTTTCG TTGGTCTACT CCAACCCATT CGTAGTGAAG GTTGCTCCGG AACGAAACTA CTACGATCTC ATTTCGGTCT GGCGACCTTG GCCAGAAAAT TCTTTGACAA GATGCGACAA CCAGTCTGTC CTATCCGTTT CTAAGGACAC AAATGATTCA ACCGATGTGT GCCGTCCACA ATATCGATCA AACCGAACAC CTGCAGATAT CCATTTTCAA AAATATCATC AAATTCCCAA ACCGAAAAAG ATGCATCTCA TTTTGCCACA AGTCGACAAA AACAATGACA AAAAAGGAAT TTTAGTAATT GGGGATGTAC ACGGCTGTTT TCACGAACTG CTACGTTTAC ACGAAAAAGC CGTTCAAGAG AATGGCGGTT TGCAGTTTCA ATACGTGATT TTGGTGGGTG ATCTATGCAA CAAAGGACCG GATTCGACAA ATGTGATTCG GCACGTTCGT GCGTCTCCCA ACTGGCTTTG TGTGAGAGGT AACCACGACG ATGGTGCTTT AGCAGCTGCT TTAGGTGACG AATGCCGGCA AAGAAAAGCC AGGTATCACT GGATATTTGG TATCGATAAG ACCGGATCTT CGAACACAAA TGTTTTATCT GACGAAGATG TCTTGTGGAT GGCGAACTTG CCGTACACAA TCCGTATACC AGCGGTGGTA CTCGGAGAAG AGATGGATAC ACTTATTGTA CATGCAGGAC TCATACCAGG CGTTCTGCTC AAGGATCAAT CCATCGAGAC CATGATCACT ATTCGAGAAG TGGAAAAGGA CTCCGATAGC CACAGATTTT TCTACTGCAA ACGAAGCAAC GAGGATTCTA AGGAGCGATT TTTGTGGGCC GACGTATGGA AAGGTCCTGA ACGCGTGATA TTTGGACACG ATGCACGCAG AGGACTGCAG CAACGTAAGG ATAAATGGAC ATTGGGCCTT GACACCGGAG TAGTTTACGG AAAGAAGCTC ATGGGAGTTA TTCTTCCCCA ACGAAAGCTT GTCCAAATTG ATGCAGTCAA GACCCACAAA TCAGTTTGAT GGGGACGAAG AGCTTGAAGA CTGCATAGAT TCTTTTGTGT AAGGCAGAGA TGATTGTCAT TTTTGCATGA GGCTATCTTT GTGAAAGCCG AACAGATATG TTCCTGTGTT AATTGGCAGG AATGTAAAGC ACATGCAACA AGACTCAATT AAACGGTGGG CTTACGGGGA TCAAGAAG
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Protein sequence | MKSSRLTHER LIPLALSLVY SNPFVVKVAP ERNYYDLISV WRPWPENSLT RCDNQSVLSV SKDTNDSTDV CRPQYRSNRT PADIHFQKYH QIPKPKKMHL ILPQVDKNND KKGILVIGDV HGCFHELLRL HEKAVQENGG LQFQYVILVG DLCNKGPDST NVIRHVRASP NWLCVRGNHD DGALAAALGD ECRQRKARYH WIFGIDKTGS SNTNVLSDED VLWMANLPYT IRIPAVVLGE EMDTLIVHAG LIPGVLLKDQ SIETMITIRE VEKDSDSHRF FYCKRSNEDS KERFLWADVW KGPERVIFGH DARRGLQQRK DKWTLGLDTG VVYGKKLMGV ILPQRKLVQI DAVKTHKSV
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