Gene PHATRDRAFT_47351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47351 
Symbol 
ID7202406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp369864 
End bp371181 
Gene Length1318 bp 
Protein Length359 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181541 
Protein GI219122416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAGAGCAAT CCATGTAGGT ACGATGAGGT GAATTTGCTA TCACCCTCCT CAGCGTCTTA 
TGAAGTCTTC TCGGTTGACA CATGAACGTC TTATCCCTTT GGCACTTTCG TTGGTCTACT
CCAACCCATT CGTAGTGAAG GTTGCTCCGG AACGAAACTA CTACGATCTC ATTTCGGTCT
GGCGACCTTG GCCAGAAAAT TCTTTGACAA GATGCGACAA CCAGTCTGTC CTATCCGTTT
CTAAGGACAC AAATGATTCA ACCGATGTGT GCCGTCCACA ATATCGATCA AACCGAACAC
CTGCAGATAT CCATTTTCAA AAATATCATC AAATTCCCAA ACCGAAAAAG ATGCATCTCA
TTTTGCCACA AGTCGACAAA AACAATGACA AAAAAGGAAT TTTAGTAATT GGGGATGTAC
ACGGCTGTTT TCACGAACTG CTACGTTTAC ACGAAAAAGC CGTTCAAGAG AATGGCGGTT
TGCAGTTTCA ATACGTGATT TTGGTGGGTG ATCTATGCAA CAAAGGACCG GATTCGACAA
ATGTGATTCG GCACGTTCGT GCGTCTCCCA ACTGGCTTTG TGTGAGAGGT AACCACGACG
ATGGTGCTTT AGCAGCTGCT TTAGGTGACG AATGCCGGCA AAGAAAAGCC AGGTATCACT
GGATATTTGG TATCGATAAG ACCGGATCTT CGAACACAAA TGTTTTATCT GACGAAGATG
TCTTGTGGAT GGCGAACTTG CCGTACACAA TCCGTATACC AGCGGTGGTA CTCGGAGAAG
AGATGGATAC ACTTATTGTA CATGCAGGAC TCATACCAGG CGTTCTGCTC AAGGATCAAT
CCATCGAGAC CATGATCACT ATTCGAGAAG TGGAAAAGGA CTCCGATAGC CACAGATTTT
TCTACTGCAA ACGAAGCAAC GAGGATTCTA AGGAGCGATT TTTGTGGGCC GACGTATGGA
AAGGTCCTGA ACGCGTGATA TTTGGACACG ATGCACGCAG AGGACTGCAG CAACGTAAGG
ATAAATGGAC ATTGGGCCTT GACACCGGAG TAGTTTACGG AAAGAAGCTC ATGGGAGTTA
TTCTTCCCCA ACGAAAGCTT GTCCAAATTG ATGCAGTCAA GACCCACAAA TCAGTTTGAT
GGGGACGAAG AGCTTGAAGA CTGCATAGAT TCTTTTGTGT AAGGCAGAGA TGATTGTCAT
TTTTGCATGA GGCTATCTTT GTGAAAGCCG AACAGATATG TTCCTGTGTT AATTGGCAGG
AATGTAAAGC ACATGCAACA AGACTCAATT AAACGGTGGG CTTACGGGGA TCAAGAAG
 
Protein sequence
MKSSRLTHER LIPLALSLVY SNPFVVKVAP ERNYYDLISV WRPWPENSLT RCDNQSVLSV 
SKDTNDSTDV CRPQYRSNRT PADIHFQKYH QIPKPKKMHL ILPQVDKNND KKGILVIGDV
HGCFHELLRL HEKAVQENGG LQFQYVILVG DLCNKGPDST NVIRHVRASP NWLCVRGNHD
DGALAAALGD ECRQRKARYH WIFGIDKTGS SNTNVLSDED VLWMANLPYT IRIPAVVLGE
EMDTLIVHAG LIPGVLLKDQ SIETMITIRE VEKDSDSHRF FYCKRSNEDS KERFLWADVW
KGPERVIFGH DARRGLQQRK DKWTLGLDTG VVYGKKLMGV ILPQRKLVQI DAVKTHKSV