Gene PHATRDRAFT_47332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47332 
Symbol 
ID7202394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp317926 
End bp319151 
Gene Length1226 bp 
Protein Length154 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181528 
Protein GI219122389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0518797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATACGGTTCA TCACATTTTG TATTTCGCTT GTTTGCTTTC CCTTTCTTCC CATTCCTCTT 
ATCTACATTG ACGTCAATGA TGCGGGCTAG CAACCTTGGG TTCCTTGTTT TGAGCTCTTG
TCTTTTGTCG TATTTTGCCA CGGGATTCTC GTTGCGTGCA TCGAGCCCAT ACAGAGAACG
AGTTTCTACA TTGTATGTCA TCAAACCTGG TGGGTGGCTT GCGGGGGTGG CTGCTATATC
TATCACTTTA GCATCTCCAA TTTCAGCCAC GGCTGCTGCC GATGTTGGGA ATGGATCCGA
ACTCTTTAAG GCGAACTGTG CAGGGTGTCA CGCAGGAGGT GCGAATTTTC TTGCTGAAAA
GAAAACTTTG ACGAAAGAAG CCCTGGAAAA TTTTCAGTCT TTGGACCAAC AAAAGCTTCA
AGATTTTGTG CAGAATAAGA TGCCTCACAA ATTTCTACCT TTCAAGAGTC AGTTCTCCGA
CTCTGACTAT AGCGATGTCA CGTCCTACGT ACTCGACCAG GCCATTGGAC ATAAGTGGTA
GAGGATACGG GATTTCTGAG ATAGTTATAT AGTAATTGCT AGCTAGCTAA AGAAAGCAAA
TCGTGATTTT CTTTGAGTAG AATGCGCACA CAAAATCTCG GTTCTGGCGG AACATTGAAG
GAAATCAAAT TTCCAGTAAA CAGCATTGTT TCGATCACCC ACTTGTCACT GATCTTTCAA
TCTGAACTGC CCCGAACGCG GAAGCGCGTT TTGCATCTCA AACAATATCG GGAGCGTTCA
TCTCTAAGCC GGTCGTTGTG CAGCAGTATC CGGGAAATTC CTTGTCGTCA TGCGTGTGTC
GTGTCATTTG GATAATGGAA CAACACCCGC AAAAGAACAT ACAACATACG TCTTCTAGCG
CTTCCGGACA GATTTTCGAA GAAATACGGT AGTGATTTCT CATGTGGCGC CGGAGATTGG
CTCCCGTCCA AAGTAATAAA ATAATGCTAT ACAGCATAAT CAGAACCATT CCCACAGCTG
GCAACAAATT CCCAACAATC AGAGCAAAAA CGAAAGAGAG AACCAGTTTG TTGTAGGAAA
GACTCGTCTC TTCCGAACAG TCTTTTTTGC CTTGCCAGTT TAGGCGAAGC CGGGACACCA
GTTGGGCTAT TAATACTGGG GCGCAGCAGA TTGCCATCCA AAACGTAGCT TGAGTCAAGA
CGTCAAAACA AGCGCATAGA GGGTGC
 
Protein sequence
MMRASNLGFL VLSSCLLSYF ATGFSLRASS PYRERVSTLY VIKPGGWLAG VAAISITLAS 
PISATAAADV GNGSELFKAN CAGCHAGGAN FLAEKKTLTK EALENFQSLD QQKLQDFVQN
KMPHKFLPFK SQFSDSDYSD VTSYVLDQAI GHKW