Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47276 |
Symbol | |
ID | 7202362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 161567 |
End bp | 162891 |
Gene Length | 1325 bp |
Protein Length | 413 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181670 |
Protein GI | 219122683 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTATTTGACA TCATCAGAAT GGTTCATTGA TTATAAGAAA AAGTTCATTT CCTTCCTTCT GTGAAGAAGG TAAGGACCTC AATATGATAA AGGAAGGGAA TGTAACGTCC ACCAAGCTCA AGGGTCACCA AGGGCCAGTA TTGTGCTTGG CGCACAGTGG CACAAATACA AGCGGCGTCT CCACGGCGTC GCAATCGTCC GCTGCTGCTT CATTGCTTTC CGGATCGGAA GACAGTACAT CTCGGGTGTG GGATTTACGG AGTAATTGCG TTCGCGCTTC GCTCTGCATC AAGGCTCCTG GCGCAGTCCT GTCCGTTTCC TTTGGCCCGC GATGGACCGA CCCCTCGGAC AGCATTGCGC GTGATGGTCC ATCGCAAGTT CGTCGAGACT ACTCTGTTTT CTTGTCGGTA GGAAATTCCG TTCTCGGATA TGACTTGAGG TACGCCTCGT CCCCTGTCAT AGTGGAACCC TCTGTTGATC TTTCCAACGT TCTGGAATCG GCAGACGAAA TCAATCAGAT TGCCTTTTCG CCACCCCGCC GTCAGCGTTC GCTACACCTA GCAGCAGCGG ACGATGCGGG TTGTGTTCGT GTAACGGACG CCTTTGCACT ATCTAGCACT AGCTCAAAAA ACCATCGAAT TTTGCATCAT GGAATATCGG AGACGAACAT GGCAATGGTT ACTAGTGTTA ACTTTCGACC ACACTGCAAA CATCTCGAAT TGGCGTCGGG TGGAACGGAC TGCACAGTCA AGCTATGGGA TGTCATGAAA CCCAAGCACC CAATATCGTC TCATCTAATC GCCAACTCTG ATGCAGGTGC CAATCAAGTA TGCAATCCAC CCATGGTACA TACGATGGCA TGGAGCCCAA GTGGCCGTTT GTTGGTCGCT GGTTTGGGTG ACGGAAGCTG TTGTATTTTC GGCGTCGAGA ACCGATCGCT AATACCCGTT TCCCGCTTGG TTGACGCGCA TAGTGGGTCG ATTGCTTCGG TTTTATTTCC CGCTTGGAGA CAGGATCAAG CACATGTGGC GGCGAACGAT CGCCTTATGG TCACCACGGG GAACGACGGT GAGATTGCTT TTTGGGACCT TGGCGACATG TTGTGTGCCG AGGGTGCTCT GAACCCTTTG GATATCTTGA ATCTAGGAGA ATCGACGCTG GAAAATCTCT GTTTGTCGGA TCAACCAAAG GTTTTGTCTG CCATTCCCCA TGGTCGAAAA CCCAACTGGA TGGTAACAAG TTTACACGAT CCAATATTTC CAACTACTGT GTTCATTGCC GATACCTCCA ACGAGATCAC AGCTTACCAA ATGCCTACCA GATGA
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Protein sequence | MIKEGNVTST KLKGHQGPVL CLAHSGTNTS GVSTASQSSA AASLLSGSED STSRVWDLRS NCVRASLCIK APGAVLSVSF GPRWTDPSDS IARDGPSQVR RDYSVFLSVG NSVLGYDLRY ASSPVIVEPS VDLSNVLESA DEINQIAFSP PRRQRSLHLA AADDAGCVRV TDAFALSSTS SKNHRILHHG ISETNMAMVT SVNFRPHCKH LELASGGTDC TVKLWDVMKP KHPISSHLIA NSDAGANQVC NPPMVHTMAW SPSGRLLVAG LGDGSCCIFG VENRSLIPVS RLVDAHSGSI ASVLFPAWRQ DQAHVAANDR LMVTTGNDGE IAFWDLGDML CAEGALNPLD ILNLGESTLE NLCLSDQPKV LSAIPHGRKP NWMVTSLHDP IFPTTVFIAD TSNEITAYQM PTR
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