Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47043 |
Symbol | |
ID | 7202125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 257566 |
End bp | 258496 |
Gene Length | 931 bp |
Protein Length | 281 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181170 |
Protein GI | 219121639 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.33463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTCGAGATT TCCTGTCTAT CACAACATCG TGCCAAGCTT TAAAGCCCTC ACTGTCAATC AGAACCATCC ATTATCAGTA ACGTTATGGG TGATGCGATC AGCTCATTAC TTTTTCAGCC GCCTCCTCCG ACGTTCCTGC ACCCGAGTCG GCATTTCTGG CTAAATACGT CGCACGGAAG CCGCATCCCA GCCTTTTTTA TTGAACGACC AAATGCATCC GTAACAATTC TGTTCTCACA TGGCAATGCG GAAGATCTGG GGATGATTTA TGATTGGTTC AACGACTTGG CGCGAGTGCT GAGAGTGAAC ATAATGGCCT ACGACTACAC CGGATACGGC AAGTCAAATG GTCACCCATC AGAAGAACAA TGTTACCAAG ATATTGAAGC CGCCTATCGA TACTTGACAG AAGTTCGACG CCTTCAGCCT GAGCAAGTTG TCCTCTACGG TCGGTCTCTT GGCAGTGGTC CATCTTGCTA TCTCGCGTCA AAAACGGCCA AAGAAGGGCG CTCGGTTGGC GGGGTTATTT TGCAATCGCC TTTGCTTTCT GCGTACCGCG TGGCTTTCAA CTTTCGATTT ACTATGGTGG GAGACAAGTT TCCAAATATC GACTTCGCAT CGAAAATCGC TTGTCCAGTT TTTATCGTCC ACGGAACACA GGACGAAGTG GTTCCGTTTT GGCACGGACA AGACTTATTC TTGGCTCTTA AACAGGAGTG GCGTGCCAAA CCTTTTTGGG TGGACGGAGC GGGGCACAAT AATATCGAAG CAATGTTGAG GTCGACTGGT ACTTTTGTTG CCAAATTGAT GGAATTTCTG GATTTGCACG TGGTGGCCCG CCGCGGGAAG ATTGGACCGC CACTTGTGGT ACCGGAGTGC GTTCCGATCG CTTTACGGGA ATTGCAGGGA ATGCTAGGGC GGGTTCGATA G
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Protein sequence | MGDAISSLLF QPPPPTFLHP SRHFWLNTSH GSRIPAFFIE RPNASVTILF SHGNAEDLGM IYDWFNDLAR VLRVNIMAYD YTGYGKSNGH PSEEQCYQDI EAAYRYLTEV RRLQPEQVVL YGRSLGSGPS CYLASKTAKE GRSVGGVILQ SPLLSAYRVA FNFRFTMVGD KFPNIDFASK IACPVFIVHG TQDEVVPFWH GQDLFLALKQ EWRAKPFWVD GAGHNNIEAM LRSTGTFVAK LMEFLDLHVV ARRGKIGPPL VVPECVPIAL RELQGMLGRV R
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