Gene PHATRDRAFT_47043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47043 
Symbol 
ID7202125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp257566 
End bp258496 
Gene Length931 bp 
Protein Length281 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181170 
Protein GI219121639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.33463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTCGAGATT TCCTGTCTAT CACAACATCG TGCCAAGCTT TAAAGCCCTC ACTGTCAATC 
AGAACCATCC ATTATCAGTA ACGTTATGGG TGATGCGATC AGCTCATTAC TTTTTCAGCC
GCCTCCTCCG ACGTTCCTGC ACCCGAGTCG GCATTTCTGG CTAAATACGT CGCACGGAAG
CCGCATCCCA GCCTTTTTTA TTGAACGACC AAATGCATCC GTAACAATTC TGTTCTCACA
TGGCAATGCG GAAGATCTGG GGATGATTTA TGATTGGTTC AACGACTTGG CGCGAGTGCT
GAGAGTGAAC ATAATGGCCT ACGACTACAC CGGATACGGC AAGTCAAATG GTCACCCATC
AGAAGAACAA TGTTACCAAG ATATTGAAGC CGCCTATCGA TACTTGACAG AAGTTCGACG
CCTTCAGCCT GAGCAAGTTG TCCTCTACGG TCGGTCTCTT GGCAGTGGTC CATCTTGCTA
TCTCGCGTCA AAAACGGCCA AAGAAGGGCG CTCGGTTGGC GGGGTTATTT TGCAATCGCC
TTTGCTTTCT GCGTACCGCG TGGCTTTCAA CTTTCGATTT ACTATGGTGG GAGACAAGTT
TCCAAATATC GACTTCGCAT CGAAAATCGC TTGTCCAGTT TTTATCGTCC ACGGAACACA
GGACGAAGTG GTTCCGTTTT GGCACGGACA AGACTTATTC TTGGCTCTTA AACAGGAGTG
GCGTGCCAAA CCTTTTTGGG TGGACGGAGC GGGGCACAAT AATATCGAAG CAATGTTGAG
GTCGACTGGT ACTTTTGTTG CCAAATTGAT GGAATTTCTG GATTTGCACG TGGTGGCCCG
CCGCGGGAAG ATTGGACCGC CACTTGTGGT ACCGGAGTGC GTTCCGATCG CTTTACGGGA
ATTGCAGGGA ATGCTAGGGC GGGTTCGATA G
 
Protein sequence
MGDAISSLLF QPPPPTFLHP SRHFWLNTSH GSRIPAFFIE RPNASVTILF SHGNAEDLGM 
IYDWFNDLAR VLRVNIMAYD YTGYGKSNGH PSEEQCYQDI EAAYRYLTEV RRLQPEQVVL
YGRSLGSGPS CYLASKTAKE GRSVGGVILQ SPLLSAYRVA FNFRFTMVGD KFPNIDFASK
IACPVFIVHG TQDEVVPFWH GQDLFLALKQ EWRAKPFWVD GAGHNNIEAM LRSTGTFVAK
LMEFLDLHVV ARRGKIGPPL VVPECVPIAL RELQGMLGRV R