Gene PHATRDRAFT_46547 details

Gene Information

• Locus tag: PHATRDRAFT_46547
• ID: 7201690
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: -
• Start bp: 670811
• End bp: 672971
• Gene Length: 2161 bp
• Protein Length: 464 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002181049
• Protein GI: 219120629

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0594837
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GACGACAGAA CCTCTACTAT GGGACGGAGG GTTTTCATTG CCACCGACGA CTGCTTTCTT 
GTTCGATCGA AATTGTATCG AGAACGGCAT TCGAATTCGT CGACTCCGTT GCAAGGACCA 
ATGCCGGACT CGCAATCGTA CGAAATCTTC GCATGCGTAA CTGGCTTACG CGGCCTGAAT 
TCACTGTCAA CGTCACGCAA TCTGGGGTAG ACTGTGATGG CCACATGAGC GCGGACAATT 
ATGATGGGAT TGCCAGGCAA ATCCTTTCAA TCTGGATATG ATAAGGAATG TCAAAACGTG 
AACCAAAAAA TGAACGATTA CAGATATGTC TACGTACGGC CGGTAGTGAA GTTCAACCAA 
AGTATCCACG AATGGCGGCG ATTCTCACCG GTCCTCGCAT CAAGAACGAC TGCACCTATC 
CGATTCTCCG TTTTTACAGA GCTCACATTT CGTTGGGAAG CAACGTATTC ACCACCCTCT 
CCCTTCTACA AGATAAAATT GTGTTGCTAA CCCAAGATGC TCTTCAAACT TGCGATCATC 
TGGGCCACTT TGACGAGCGC TACCCAGGCT CAAAACTCGG CTTGTACTGC AGCAACCTCT 
ATCTCTGCTC TTCCAGCTTC AGTGAGCGGG GACACCTCCA ATGTTTCTCC TGTTCAAGAT 
GTTGCCGCTG AAAGCTGTCA ACTTGCGAGG GGGCCCTTGG CCAGTAGTTG GTACTCTTAC 
GTTGCCGAGA GCGATGGTTG CCTCACTGCG AAAGTTACCC CACCAGCCGC GGATGAATGG 
GACACCATCT TGACGGCTCA TTCGGGTGAC AGTTGCTCCG CTCTTTCGTG TGTTGCCATG 
AACGATGATG TTGACGTAGT AACTGAGCGC GGAAGTGAGG TCCGCATCAA TGCTGTTACA 
GGCACGACCT ATTACTTTAT GGTCGCTGGC TATGACAATG ATGAGCCTGG TGGTCGATTC 
GAATTTGCGC TCTCGGTAAG ACTACGTGTG AATGCTGAGA AACTTGCTAC GCCAAACTCA 
CAAAATCGTA TGCTCTTTTT TGTTTCCTTC CCTCTGTCCT CTTCAGCAAA CGTCTGATGC 
TACGTGCTCT AACCCGACGG GAAATCAGTG GTGTCCTATT TGTCCCGATG GTGGCCAACC 
CAGCGCCACC GCCATCTTCG ATGAAAATGT GCTATGCAGC GGTGCTGGGG CCGATGAAGA 
ATCAGTCGAA GGAGACGAGG CCTGTGGTAT TCTGCAAGTG ATCGGCTCGG CCGTTTGTGG 
CTGTACGCCT GCGAGCACTG CGACGTGTTC TCTGTGTCCC AGCAGTGAAC CTATCTCGAG 
TCCCATGCAG TCTATCCTTG TTTCAGAGAC GGTGACGTGC GGGGATATCA GCGTTGTCGG 
TGGTAGTGAT AGCTGCGGTG CTAATAGAGA CGGCCTCGCC GCCCTTTGTG GATGCCCCGG 
TTCTGGTCCA GTGTGTCAGC TGTGCCCGGC TGGTTCCTCG TTTGATCCAA ACCGATTTGT 
ATCACCAGAC GATGAACTCA CATGCGGTGA GATCGAACTC GACTTTCGTA AAGAAGTCAT 
TCTGTTCCCC AGTATTGGTT GCACGCCTTC CGCTGTGGAT TTTGTTTTTC AAGCGAATGT 
GGTTGACTTT TGCTGCAACG GGGCTAACCT CGAGTCCAAT CCGAATCTTA CTTTTCCTCC 
AACCGGATCC ACTCCTAATG GAGCTCCTAT GGCTATGCCA ATGACAACGC TGTCGCCAGC 
CGCTACCACC GCTCCAGAAT CTGCTCCCAC TGGCGCTCCT CAGGCTAGTT CCCCCACTGT 
CATCAACACC TCGACTCCAG GATCTGTAAC CACTACTTCC CCCATGGCTA CGCCAGTGAC 
AACGACTGCA CCAGCTACCA CGCCGACTTC AGAAACTCCT AACTCTGCCA CGCCCACGTC 
TAGCCCTCCT GTCTCGCAAC CTGCAGGAAC TTCCGACGCT TCTCGCTCCC GCAGTAAGGT 
TTCTATGACG TTGACTTTTC TTACTACTGC GGCGTTAGTC TCTGTGTCTG CTTTTAAAGC 
GTGCTAAGCG TGCTGAGGTT GAATAGCGTA AAAGTGGTAG TATAAAGTGC CATGTCAATG 
GGCTTTTGAT TGGTAGAAAT CCCGGTAATG GCTTAGACTC TGCATTAGAA ACGTAATAAA 
A 

 

Protein sequence

MLFKLAIIWA TLTSATQAQN SACTAATSIS ALPASVSGDT SNVSPVQDVA AESCQLARGP 
LASSWYSYVA ESDGCLTAKV TPPAADEWDT ILTAHSGDSC SALSCVAMND DVDVVTERGS 
EVRINAVTGT TYYFMVAGYD NDEPGGRFEF ALSQTSDATC SNPTGNQWCP ICPDGGQPSA 
TAIFDENVLC SGAGADEESV EGDEACGILQ VIGSAVCGCT PASTATCSLC PSSEPISSPM 
QSILVSETVT CGDISVVGGS DSCGANRDGL AALCGCPGSG PVCQLCPAGS SFDPNRFVSP 
DDELTCGEIE LDFRKEVILF PSIGCTPSAV DFVFQANVVD FCCNGANLES NPNLTFPPTG 
STPNGAPMAM PMTTLSPAAT TAPESAPTGA PQASSPTVIN TSTPGSVTTT SPMATPVTTT 
APATTPTSET PNSATPTSSP PVSQPAGTSD ASRSRISVSA FKAC