| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46344 |
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| Symbol | |
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| ID | 7201896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | + |
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| Start bp | 56932 |
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| End bp | 58635 |
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| Gene Length | 1704 bp |
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| Protein Length | 483 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180743 |
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| Protein GI | 219119989 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00912933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCGCTTTTT GACGGTGAAC TTCATTTCTA AATTTATTCT GCGTTTCGGA ATTGTCAAGG
AGGAACCAAA AATCGCATGG CTACAAGGCG AGACCGGATT GACGATTCCG TTTTGGAAAA
ACCAAATCGA CTCGCGGATT GGCATCCTTC GTCGTGAACA CGTGCTCTTT TACATCGTCA
CAGAAAGTCA CATCCAAGGT CATGTCTTGA AAGAAACAAT AGCAACAGAT GGTGTACAAA
AATAGGAAGC GGCAGTTTAG GATCGAGACG TCATATGGAG CAATGATTTC GGTGGCGAGG
GTCTTCGTTC TTTTTATGAG TGGCAGTCGA GCTGTTACGG AAACACACGA TCGGACGCGT
TGTTCCAGTA CCCTCCGGAA GGATGAGTTT GATTGGGATG CCTGGCAAAT TGGCACCGGG
AAGCCGTACG CTGCTGTCGT CGAAAGCAAC GGCAAACGTG ACGCTTCCTT CCTCGATGGA
ACCTGTTTTG CCGACCGTGG TTGGAACATC TTGCCGTCCA TTGCCACCTT ACGGTCTATC
AAGGTCGAAT CACCCAAAGG TGAGGCAAGT GTCGTTGATG CAACAACCCT TCACGTCGAT
GGACATTCCG TTCGTGGTCG CATGGCACTG CTACGCTATC TCATCGAGGA ATGGGAAGAT
TCGTTGTTTT TCCCTAAGCT CAATCTTCAG CCGGACGTCG CCATTTGGGG ATCCAGTGGG
TCGACCAACG AGTATCACTG GTTGTGGGCG TACGGCGCCC AACTTGACTG GCAGCAGCGC
TCAGGCCGAT TGGCGATCGG TAAAGACGAA CCGGATGATG GCGATCATAT TTCGGTACGT
TCCTGGTGGG GCTACATGAA CTACTGTTTC TCCGTGGCCG TCCTCCTGGG CGCCATCGAA
GCCACCAACA GCATTCAAAC AATCGACGAC GTCCAAGAAA CAGCAGTAAC TGTTGAATTA
GATGCGGATA GTCAACGATT GATGGAAGAA GACTATGCCG TTCGGGATTG TGTCACATAC
TGGCGCGACT TTTTCCAATG CGAGTATCCC AACTATCAAA CGCGAATACG CGACGCCACG
AAGCAGTTGG ACGAGAAGCC CATAACTACC AATAACATCA AGGAAGAAGA CTTCCAACGG
CTACGCTTTG AATTTCAAAA AGAAGTGTGG AAGGTACATA CGAAAGTGAT CGAGCGCGCG
GCTTCTTCCG CAAGGTCCAA ACAGCTTTTG AATGTTTTGC CCAAAGCAGA GCAGCAATTT
GGACTTGGCT GGTCGCGTAT GGTGGATATA TTGGCAGCGT CCGTCTTTCC GACCGATTTG
GTGACCTTGA TCGAGGACGG AAGCGGCTTT CTGCCTTACA ATATTACTAT GACCACGGCC
CTTGGGCAAA ACACTCCTAA GGTTGTGATT GAAAACCCTG CGAGCTACCG AGATCCCCAT
ACACGGAGAA ACTTAGTGGC ACAGTCGCAA CAGCGTTCGA TTGACACGAC GCATCAATTG
GTGCTTTTAC CCGACTGGGC TTTGTCCACA ATGGTACACT TCTGGAGTCG CGTTGTGCGT
CAGCCATGGA TCAGTCGGGA AATGCCTGCT CGAGTCAATC GTTTGGTCCA CGGATCAGTG
AAGGTCAAAC TAAAAGAGCT TTTCAGGGTG TTAGTTCTTT TCGTCAAGCC AAAAATCTAA
GAAATAGTTC ACACCATTTC AAGG
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| Protein sequence | MVYKNRKRQF RIETSYGAMI SVARVFVLFM SGSRAVTETH DRTRCSSTLR KDEFDWDAWQ
IGTGKPYAAV VESNGKRDAS FLDGTCFADR GWNILPSIAT LRSIKVESPK GEASVVDATT
LHVDGHSVRG RMALLRYLIE EWEDSLFFPK LNLQPDVAIW GSSGSTNEYH WLWAYGAQLD
WQQRSGRLAI GKDEPDDGDH ISVRSWWGYM NYCFSVAVLL GAIEATNSIQ TIDDVQETAV
TVELDADSQR LMEEDYAVRD CVTYWRDFFQ CEYPNYQTRI RDATKQLDEK PITTNNIKEE
DFQRLRFEFQ KEVWKVHTKV IERAASSARS KQLLNVLPKA EQQFGLGWSR MVDILAASVF
PTDLVTLIED GSGFLPYNIT MTTALGQNTP KVVIENPASY RDPHTRRNLV AQSQQRSIDT
THQLVLLPDW ALSTMVHFWS RVVRQPWISR EMPARVNRLV HGSVKVKLKE LFRVLVLFVK
PKI
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